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The global catalogue of microorganisms 10K type strain sequencing project: closing the genomic gaps for the validly published prokaryotic and fungi species.
Wu L, McCluskey K, Desmeth P, Liu S, Hideaki S, Yin Y, Moriya O, Itoh T, Kim CY, Lee JS, Zhou Y, Kawasaki H, Hazbón MH, Robert V, Boekhout T, Lima N, Evtushenko L, Boundy-Mills K, Bunk B, Moore ERB, Eurwilaichitr L, Ingsriswang S, Shah H, Yao S, Jin T, Huang J, Shi W, Sun Q, Fan G, Li W, Li X, Kurtböke I, Ma J. Wu L, et al. Among authors: boekhout t. Gigascience. 2018 May 1;7(5):giy026. doi: 10.1093/gigascience/giy026. Gigascience. 2018. PMID: 29718202 Free PMC article.
Phylogenomics reveal a robust fungal tree of life.
Kuramae EE, Robert V, Snel B, Weiss M, Boekhout T. Kuramae EE, et al. Among authors: boekhout t. FEMS Yeast Res. 2006 Dec;6(8):1213-20. doi: 10.1111/j.1567-1364.2006.00119.x. FEMS Yeast Res. 2006. PMID: 17156018
Nomenclatural issues concerning cultured yeasts and other fungi: why it is important to avoid unneeded name changes.
Yurkov A, Alves A, Bai FY, Boundy-Mills K, Buzzini P, Čadež N, Cardinali G, Casaregola S, Chaturvedi V, Collin V, Fell JW, Girard V, Groenewald M, Hagen F, Hittinger CT, Kachalkin AV, Kostrzewa M, Kouvelis V, Libkind D, Liu X, Maier T, Meyer W, Péter G, Piątek M, Robert V, Rosa CA, Sampaio JP, Sipiczki M, Stadler M, Sugita T, Sugiyama J, Takagi H, Takashima M, Turchetti B, Wang QM, Boekhout T. Yurkov A, et al. Among authors: boekhout t. IMA Fungus. 2021 Jul 13;12(1):18. doi: 10.1186/s43008-021-00067-x. IMA Fungus. 2021. PMID: 34256869 Free PMC article.
Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi.
Schoch CL, Robbertse B, Robert V, Vu D, Cardinali G, Irinyi L, Meyer W, Nilsson RH, Hughes K, Miller AN, Kirk PM, Abarenkov K, Aime MC, Ariyawansa HA, Bidartondo M, Boekhout T, Buyck B, Cai Q, Chen J, Crespo A, Crous PW, Damm U, De Beer ZW, Dentinger BT, Divakar PK, Dueñas M, Feau N, Fliegerova K, García MA, Ge ZW, Griffith GW, Groenewald JZ, Groenewald M, Grube M, Gryzenhout M, Gueidan C, Guo L, Hambleton S, Hamelin R, Hansen K, Hofstetter V, Hong SB, Houbraken J, Hyde KD, Inderbitzin P, Johnston PR, Karunarathna SC, Kõljalg U, Kovács GM, Kraichak E, Krizsan K, Kurtzman CP, Larsson KH, Leavitt S, Letcher PM, Liimatainen K, Liu JK, Lodge DJ, Luangsa-ard JJ, Lumbsch HT, Maharachchikumbura SS, Manamgoda D, Martín MP, Minnis AM, Moncalvo JM, Mulè G, Nakasone KK, Niskanen T, Olariaga I, Papp T, Petkovits T, Pino-Bodas R, Powell MJ, Raja HA, Redecker D, Sarmiento-Ramirez JM, Seifert KA, Shrestha B, Stenroos S, Stielow B, Suh SO, Tanaka K, Tedersoo L, Telleria MT, Udayanga D, Untereiner WA, Diéguez Uribeondo J, Subbarao KV, Vágvölgyi C, Visagie C, Voigt K, Walker DM, Weir BS, Weiß M, Wijayawardene NN, Wingfield MJ, Xu JP, Yang ZL, Zhang N, Zhuang WY, Federhen S. Schoch CL, et al. Among authors: boekhout t. Database (Oxford). 2014 Jun 30;2014:bau061. doi: 10.1093/database/bau061. Print 2014. Database (Oxford). 2014. PMID: 24980130 Free PMC article.
Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation.
Vu D, Groenewald M, de Vries M, Gehrmann T, Stielow B, Eberhardt U, Al-Hatmi A, Groenewald JZ, Cardinali G, Houbraken J, Boekhout T, Crous PW, Robert V, Verkley GJM. Vu D, et al. Among authors: boekhout t. Stud Mycol. 2019 Mar;92:135-154. doi: 10.1016/j.simyco.2018.05.001. Epub 2018 May 30. Stud Mycol. 2019. PMID: 29955203 Free PMC article.
359 results