Kinoshita K - Search Results

1

Omics research project on prospective cohort studies from the Tohoku Medical Megabank Project.

Koshiba S, Motoike I, Saigusa D, Inoue J, Shirota M, Katoh Y, Katsuoka F, Danjoh I, Hozawa A, Kuriyama S, Minegishi N, Nagasaki M, Takai-Igarashi T, Ogishima S, Fuse N, Kure S, Tamiya G, Tanabe O, Yasuda J, Kinoshita K, Yamamoto M. Koshiba S, et al. Among authors: kinoshita k. Genes Cells. 2018 Jun;23(6):406-417. doi: 10.1111/gtc.12588. Epub 2018 Apr 27. Genes Cells. 2018. PMID: 29701317 Free article. Review.

2

Effects of surface-to-volume ratio of proteins on hydrophilic residues: decrease in occurrence and increase in buried fraction.

Shirota M, Ishida T, Kinoshita K. Shirota M, et al. Among authors: kinoshita k. Protein Sci. 2008 Sep;17(9):1596-602. doi: 10.1110/ps.035592.108. Epub 2008 Jun 12. Protein Sci. 2008. PMID: 18556475 Free PMC article.

3

Analyses on hydrophobicity and attractiveness of all-atom distance-dependent potentials.

Shirota M, Ishida T, Kinoshita K. Shirota M, et al. Among authors: kinoshita k. Protein Sci. 2009 Sep;18(9):1906-15. doi: 10.1002/pro.201. Protein Sci. 2009. PMID: 19588493 Free PMC article.

4

Development of a new meta-score for protein structure prediction from seven all-atom distance dependent potentials using support vector regression.

Shirota M, Ishida T, Kinoshita K. Shirota M, et al. Among authors: kinoshita k. Genome Inform. 2009 Oct;23(1):149-58. Genome Inform. 2009. PMID: 20180270 Free article.

5

Absolute quality evaluation of protein model structures using statistical potentials with respect to the native and reference states.

Shirota M, Ishida T, Kinoshita K. Shirota M, et al. Among authors: kinoshita k. Proteins. 2011 May;79(5):1550-63. doi: 10.1002/prot.22982. Epub 2011 Mar 1. Proteins. 2011. PMID: 21365682

6

Comprehensive classification and diversity assessment of atomic contacts in protein-small ligand interactions.

Kasahara K, Shirota M, Kinoshita K. Kasahara K, et al. Among authors: kinoshita k. J Chem Inf Model. 2013 Jan 28;53(1):241-8. doi: 10.1021/ci300377f. Epub 2012 Dec 18. J Chem Inf Model. 2013. PMID: 23186137

7

COXPRESdb: a database of comparative gene coexpression networks of eleven species for mammals.

Obayashi T, Okamura Y, Ito S, Tadaka S, Motoike IN, Kinoshita K. Obayashi T, et al. Among authors: kinoshita k. Nucleic Acids Res. 2013 Jan;41(Database issue):D1014-20. doi: 10.1093/nar/gks1014. Epub 2012 Nov 29. Nucleic Acids Res. 2013. PMID: 23203868 Free PMC article.

8

Ion concentration-dependent ion conduction mechanism of a voltage-sensitive potassium channel.

Kasahara K, Shirota M, Kinoshita K. Kasahara K, et al. Among authors: kinoshita k. PLoS One. 2013;8(2):e56342. doi: 10.1371/journal.pone.0056342. Epub 2013 Feb 13. PLoS One. 2013. PMID: 23418558 Free PMC article.

9

Analyses of the general rule on residue pair frequencies in local amino acid sequences of soluble, ordered proteins.

Shirota M, Kinoshita K. Shirota M, et al. Among authors: kinoshita k. Protein Sci. 2013 Jun;22(6):725-33. doi: 10.1002/pro.2255. Epub 2013 Apr 29. Protein Sci. 2013. PMID: 23526551 Free PMC article.

10

[Molecular dynamics simulation, ion channel, dynamic structure, bioinformatics].

Kasahara K, Shirota M, Kino-Shita K. Kasahara K, et al. Seikagaku. 2013 Aug;85(8):656-62. Seikagaku. 2013. PMID: 24050008 Review. Japanese. No abstract available.

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