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202 results

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Propagating annotations of molecular networks using in silico fragmentation.
da Silva RR, Wang M, Nothias LF, van der Hooft JJJ, Caraballo-Rodríguez AM, Fox E, Balunas MJ, Klassen JL, Lopes NP, Dorrestein PC. da Silva RR, et al. PLoS Comput Biol. 2018 Apr 18;14(4):e1006089. doi: 10.1371/journal.pcbi.1006089. eCollection 2018 Apr. PLoS Comput Biol. 2018. PMID: 29668671 Free PMC article.
Illuminating the dark matter in metabolomics.
da Silva RR, Dorrestein PC, Quinn RA. da Silva RR, et al. Proc Natl Acad Sci U S A. 2015 Oct 13;112(41):12549-50. doi: 10.1073/pnas.1516878112. Epub 2015 Oct 1. Proc Natl Acad Sci U S A. 2015. PMID: 26430243 Free PMC article. No abstract available.
From Sample to Multi-Omics Conclusions in under 48 Hours.
Quinn RA, Navas-Molina JA, Hyde ER, Song SJ, Vázquez-Baeza Y, Humphrey G, Gaffney J, Minich JJ, Melnik AV, Herschend J, DeReus J, Durant A, Dutton RJ, Khosroheidari M, Green C, da Silva R, Dorrestein PC, Knight R. Quinn RA, et al. mSystems. 2016 Apr 26;1(2):e00038-16. doi: 10.1128/mSystems.00038-16. eCollection 2016 Mar-Apr. mSystems. 2016. PMID: 27822524 Free PMC article.
Lifestyle chemistries from phones for individual profiling.
Bouslimani A, Melnik AV, Xu Z, Amir A, da Silva RR, Wang M, Bandeira N, Alexandrov T, Knight R, Dorrestein PC. Bouslimani A, et al. Among authors: da silva rr. Proc Natl Acad Sci U S A. 2016 Nov 29;113(48):E7645-E7654. doi: 10.1073/pnas.1610019113. Epub 2016 Nov 14. Proc Natl Acad Sci U S A. 2016. PMID: 27849584 Free PMC article.
Three-Dimensional Microbiome and Metabolome Cartography of a Diseased Human Lung.
Garg N, Wang M, Hyde E, da Silva RR, Melnik AV, Protsyuk I, Bouslimani A, Lim YW, Wong R, Humphrey G, Ackermann G, Spivey T, Brouha SS, Bandeira N, Lin GY, Rohwer F, Conrad DJ, Alexandrov T, Knight R, Dorrestein PC. Garg N, et al. Among authors: da silva rr. Cell Host Microbe. 2017 Nov 8;22(5):705-716.e4. doi: 10.1016/j.chom.2017.10.001. Epub 2017 Oct 19. Cell Host Microbe. 2017. PMID: 29056429 Free PMC article.
Niche partitioning of a pathogenic microbiome driven by chemical gradients.
Quinn RA, Comstock W, Zhang T, Morton JT, da Silva R, Tran A, Aksenov A, Nothias LF, Wangpraseurt D, Melnik AV, Ackermann G, Conrad D, Klapper I, Knight R, Dorrestein PC. Quinn RA, et al. Sci Adv. 2018 Sep 26;4(9):eaau1908. doi: 10.1126/sciadv.aau1908. eCollection 2018 Sep. Sci Adv. 2018. PMID: 30263961 Free PMC article.
202 results