Pushkarev A - Search Results

1

The Use of a Chimeric Rhodopsin Vector for the Detection of New Proteorhodopsins Based on Color.

Pushkarev A, Hevroni G, Roitman S, Shim JG, Choi A, Jung KH, Béjà O. Pushkarev A, et al. Front Microbiol. 2018 Mar 13;9:439. doi: 10.3389/fmicb.2018.00439. eCollection 2018. Front Microbiol. 2018. PMID: 29593685 Free PMC article.

2

Functional metagenomic screen reveals new and diverse microbial rhodopsins.

Pushkarev A, Béjà O. Pushkarev A, et al. ISME J. 2016 Sep;10(9):2331-5. doi: 10.1038/ismej.2016.7. Epub 2016 Feb 19. ISME J. 2016. PMID: 26894445 Free PMC article.

3

Functional marine metagenomic screening for anti-quorum sensing and anti-biofilm activity.

Yaniv K, Golberg K, Kramarsky-Winter E, Marks R, Pushkarev A, Béjà O, Kushmaro A. Yaniv K, et al. Among authors: pushkarev a. Biofouling. 2017 Jan;33(1):1-13. doi: 10.1080/08927014.2016.1253684. Epub 2016 Nov 24. Biofouling. 2017. PMID: 27882771

4

A distinct abundant group of microbial rhodopsins discovered using functional metagenomics.

Pushkarev A, Inoue K, Larom S, Flores-Uribe J, Singh M, Konno M, Tomida S, Ito S, Nakamura R, Tsunoda SP, Philosof A, Sharon I, Yutin N, Koonin EV, Kandori H, Béjà O. Pushkarev A, et al. Nature. 2018 Jun;558(7711):595-599. doi: 10.1038/s41586-018-0225-9. Epub 2018 Jun 20. Nature. 2018. PMID: 29925949 Free PMC article.

5

Mutation Study of Heliorhodopsin 48C12.

Singh M, Inoue K, Pushkarev A, Béjà O, Kandori H. Singh M, et al. Among authors: pushkarev a. Biochemistry. 2018 Aug 21;57(33):5041-5049. doi: 10.1021/acs.biochem.8b00637. Epub 2018 Aug 6. Biochemistry. 2018. PMID: 30036039

6

Heliorhodopsins are absent in diderm (Gram-negative) bacteria: Some thoughts and possible implications for activity.

Flores-Uribe J, Hevroni G, Ghai R, Pushkarev A, Inoue K, Kandori H, Béjà O. Flores-Uribe J, et al. Among authors: pushkarev a. Environ Microbiol Rep. 2019 Jun;11(3):419-424. doi: 10.1111/1758-2229.12730. Epub 2019 Jan 21. Environ Microbiol Rep. 2019. PMID: 30618066

7

Crystal structure of heliorhodopsin.

Shihoya W, Inoue K, Singh M, Konno M, Hososhima S, Yamashita K, Ikeda K, Higuchi A, Izume T, Okazaki S, Hashimoto M, Mizutori R, Tomida S, Yamauchi Y, Abe-Yoshizumi R, Katayama K, Tsunoda SP, Shibata M, Furutani Y, Pushkarev A, Béjà O, Uchihashi T, Kandori H, Nureki O. Shihoya W, et al. Among authors: pushkarev a. Nature. 2019 Oct;574(7776):132-136. doi: 10.1038/s41586-019-1604-6. Epub 2019 Sep 25. Nature. 2019. PMID: 31554965

8

Discovery of a microbial rhodopsin that is the most stable in extreme environments.

Shim JG, Soum V, Kang KW, Chuon K, Cho SG, Kim JH, Meas S, Pushkarev A, Shin K, Jung KH. Shim JG, et al. Among authors: pushkarev a. iScience. 2021 May 24;24(6):102620. doi: 10.1016/j.isci.2021.102620. eCollection 2021 Jun 25. iScience. 2021. PMID: 34151231 Free PMC article.

9

Diverse heliorhodopsins detected via functional metagenomics in freshwater Actinobacteria, Chloroflexi and Archaea.

Chazan A, Rozenberg A, Mannen K, Nagata T, Tahan R, Yaish S, Larom S, Inoue K, Béjà O, Pushkarev A. Chazan A, et al. Among authors: pushkarev a. Environ Microbiol. 2022 Jan;24(1):110-121. doi: 10.1111/1462-2920.15890. Epub 2022 Jan 4. Environ Microbiol. 2022. PMID: 34984789

10

Searching Metagenomes for New Rhodopsins.

Rodriguez-Valera F, Pushkarev A, Rosselli R, Béjà O. Rodriguez-Valera F, et al. Among authors: pushkarev a. Methods Mol Biol. 2022;2501:101-108. doi: 10.1007/978-1-0716-2329-9_4. Methods Mol Biol. 2022. PMID: 35857224

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