Read DJ - Search Results

1

Fluctuating Finite Element Analysis (FFEA): A continuum mechanics software tool for mesoscale simulation of biomolecules.

Solernou A, Hanson BS, Richardson RA, Welch R, Read DJ, Harlen OG, Harris SA. Solernou A, et al. Among authors: read dj. PLoS Comput Biol. 2018 Mar 23;14(3):e1005897. doi: 10.1371/journal.pcbi.1005897. eCollection 2018 Mar. PLoS Comput Biol. 2018. PMID: 29570700 Free PMC article.

2

Neutron-mapping polymer flow: scattering, flow visualization, and molecular theory.

Bent J, Hutchings LR, Richards RW, Gough T, Spares R, Coates PD, Grillo I, Harlen OG, Read DJ, Graham RS, Likhtman AE, Groves DJ, Nicholson TM, McLeish TC. Bent J, et al. Among authors: read dj. Science. 2003 Sep 19;301(5640):1691-5. doi: 10.1126/science.1086952. Science. 2003. PMID: 14500974

3

Understanding the apparent stator-rotor connections in the rotary ATPase family using coarse-grained computer modeling.

Richardson RA, Papachristos K, Read DJ, Harlen OG, Harrison M, Paci E, Muench SP, Harris SA. Richardson RA, et al. Among authors: read dj. Proteins. 2014 Dec;82(12):3298-311. doi: 10.1002/prot.24680. Epub 2014 Nov 11. Proteins. 2014. PMID: 25174610 Free article.

4

In pursuit of an accurate spatial and temporal model of biomolecules at the atomistic level: a perspective on computer simulation.

Gray A, Harlen OG, Harris SA, Khalid S, Leung YM, Lonsdale R, Mulholland AJ, Pearson AR, Read DJ, Richardson RA. Gray A, et al. Among authors: read dj. Acta Crystallogr D Biol Crystallogr. 2015 Jan 1;71(Pt 1):162-72. doi: 10.1107/S1399004714026777. Epub 2015 Jan 1. Acta Crystallogr D Biol Crystallogr. 2015. PMID: 25615870 Free PMC article.

5

Modelling biomacromolecular assemblies with continuum mechanics.

Hanson B, Richardson R, Oliver R, Read DJ, Harlen O, Harris S. Hanson B, et al. Among authors: read dj. Biochem Soc Trans. 2015 Apr;43(2):186-92. doi: 10.1042/BST20140294. Biochem Soc Trans. 2015. PMID: 25849915 Review.

6

Continuum mechanical parameterisation of cytoplasmic dynein from atomistic simulation.

Hanson BS, Iida S, Read DJ, Harlen OG, Kurisu G, Nakamura H, Harris SA. Hanson BS, et al. Among authors: read dj. Methods. 2021 Jan;185:39-48. doi: 10.1016/j.ymeth.2020.01.021. Epub 2020 Jan 30. Methods. 2021. PMID: 32007556 Free article.

7

PolySTRAND Model of Flow-Induced Nucleation in Polymers.

Read DJ, McIlroy C, Das C, Harlen OG, Graham RS. Read DJ, et al. Phys Rev Lett. 2020 Apr 10;124(14):147802. doi: 10.1103/PhysRevLett.124.147802. Phys Rev Lett. 2020. PMID: 32338987

8

KOBRA: a fluctuating elastic rod model for slender biological macromolecules.

Welch R, Harris SA, Harlen OG, Read DJ. Welch R, et al. Among authors: read dj. Soft Matter. 2020 Aug 19;16(32):7544-7555. doi: 10.1039/d0sm00491j. Soft Matter. 2020. PMID: 32706006

9

Exploring the dynamics of flagellar dynein within the axoneme with Fluctuating Finite Element Analysis.

Richardson RA, Hanson BS, Read DJ, Harlen OG, Harris SA. Richardson RA, et al. Among authors: read dj. Q Rev Biophys. 2020 Aug 10;53:e9. doi: 10.1017/S0033583520000062. Q Rev Biophys. 2020. PMID: 32772965

10

Combined Force-Torque Spectroscopy of Proteins by Means of Multiscale Molecular Simulation.

van der Heijden TWG, Read DJ, Harlen OG, van der Schoot P, Harris SA, Storm C. van der Heijden TWG, et al. Among authors: read dj. Biophys J. 2020 Dec 1;119(11):2240-2250. doi: 10.1016/j.bpj.2020.09.039. Epub 2020 Oct 27. Biophys J. 2020. PMID: 33121942 Free PMC article.

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