Harris SA - Search Results

1

Fluctuating Finite Element Analysis (FFEA): A continuum mechanics software tool for mesoscale simulation of biomolecules.

Solernou A, Hanson BS, Richardson RA, Welch R, Read DJ, Harlen OG, Harris SA. Solernou A, et al. Among authors: harris sa. PLoS Comput Biol. 2018 Mar 23;14(3):e1005897. doi: 10.1371/journal.pcbi.1005897. eCollection 2018 Mar. PLoS Comput Biol. 2018. PMID: 29570700 Free PMC article.

2

Modelling biomacromolecular assemblies with continuum mechanics.

Hanson B, Richardson R, Oliver R, Read DJ, Harlen O, Harris S. Hanson B, et al. Biochem Soc Trans. 2015 Apr;43(2):186-92. doi: 10.1042/BST20140294. Biochem Soc Trans. 2015. PMID: 25849915 Review.

3

KOBRA: a fluctuating elastic rod model for slender biological macromolecules.

Welch R, Harris SA, Harlen OG, Read DJ. Welch R, et al. Among authors: harris sa. Soft Matter. 2020 Aug 19;16(32):7544-7555. doi: 10.1039/d0sm00491j. Soft Matter. 2020. PMID: 32706006

4

Exploring the dynamics of flagellar dynein within the axoneme with Fluctuating Finite Element Analysis.

Richardson RA, Hanson BS, Read DJ, Harlen OG, Harris SA. Richardson RA, et al. Among authors: harris sa. Q Rev Biophys. 2020 Aug 10;53:e9. doi: 10.1017/S0033583520000062. Q Rev Biophys. 2020. PMID: 32772965

5

Continuum mechanical parameterisation of cytoplasmic dynein from atomistic simulation.

Hanson BS, Iida S, Read DJ, Harlen OG, Kurisu G, Nakamura H, Harris SA. Hanson BS, et al. Among authors: harris sa. Methods. 2021 Jan;185:39-48. doi: 10.1016/j.ymeth.2020.01.021. Epub 2020 Jan 30. Methods. 2021. PMID: 32007556 Free article.

6

Understanding the apparent stator-rotor connections in the rotary ATPase family using coarse-grained computer modeling.

Richardson RA, Papachristos K, Read DJ, Harlen OG, Harrison M, Paci E, Muench SP, Harris SA. Richardson RA, et al. Among authors: harris sa. Proteins. 2014 Dec;82(12):3298-311. doi: 10.1002/prot.24680. Epub 2014 Nov 11. Proteins. 2014. PMID: 25174610 Free article.

7

In pursuit of an accurate spatial and temporal model of biomolecules at the atomistic level: a perspective on computer simulation.

Gray A, Harlen OG, Harris SA, Khalid S, Leung YM, Lonsdale R, Mulholland AJ, Pearson AR, Read DJ, Richardson RA. Gray A, et al. Among authors: harris sa. Acta Crystallogr D Biol Crystallogr. 2015 Jan 1;71(Pt 1):162-72. doi: 10.1107/S1399004714026777. Epub 2015 Jan 1. Acta Crystallogr D Biol Crystallogr. 2015. PMID: 25615870 Free PMC article.

8

Combined Force-Torque Spectroscopy of Proteins by Means of Multiscale Molecular Simulation.

van der Heijden TWG, Read DJ, Harlen OG, van der Schoot P, Harris SA, Storm C. van der Heijden TWG, et al. Among authors: harris sa. Biophys J. 2020 Dec 1;119(11):2240-2250. doi: 10.1016/j.bpj.2020.09.039. Epub 2020 Oct 27. Biophys J. 2020. PMID: 33121942 Free PMC article.

9

Nano-encapsulated Escherichia coli Divisome Anchor ZipA, and in Complex with FtsZ.

Lee SC, Collins R, Lin YP, Jamshad M, Broughton C, Harris SA, Hanson BS, Tognoloni C, Parslow RA, Terry AE, Rodger A, Smith CJ, Edler KJ, Ford R, Roper DI, Dafforn TR. Lee SC, et al. Among authors: harris sa. Sci Rep. 2019 Dec 10;9(1):18712. doi: 10.1038/s41598-019-54999-x. Sci Rep. 2019. PMID: 31822696 Free PMC article.

10

Securing the future of research computing in the biosciences.

Leng J, Shoura M, McLeish TCB, Real AN, Hardey M, McCafferty J, Ranson NA, Harris SA. Leng J, et al. Among authors: harris sa. PLoS Comput Biol. 2019 May 16;15(5):e1006958. doi: 10.1371/journal.pcbi.1006958. eCollection 2019 May. PLoS Comput Biol. 2019. PMID: 31095554 Free PMC article.

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