Borysik AJ - Search Results

1

Structural model of human dUTPase in complex with a novel proteinaceous inhibitor.

Nyíri K, Mertens HDT, Tihanyi B, Nagy GN, Kőhegyi B, Matejka J, Harris MJ, Szabó JE, Papp-Kádár V, Németh-Pongrácz V, Ozohanics O, Vékey K, Svergun DI, Borysik AJ, Vértessy BG. Nyíri K, et al. Among authors: borysik aj. Sci Rep. 2018 Mar 12;8(1):4326. doi: 10.1038/s41598-018-22145-8. Sci Rep. 2018. PMID: 29531348 Free PMC article.

2

Quantitative Evaluation of Native Protein Folds and Assemblies by Hydrogen Deuterium Exchange Mass Spectrometry (HDX-MS).

Harris MJ, Raghavan D, Borysik AJ. Harris MJ, et al. Among authors: borysik aj. J Am Soc Mass Spectrom. 2019 Jan;30(1):58-66. doi: 10.1007/s13361-018-2070-3. Epub 2018 Oct 2. J Am Soc Mass Spectrom. 2019. PMID: 30280315 Free PMC article.

3

HDX and Native Mass Spectrometry Reveals the Different Structural Basis for Interaction of the Staphylococcal Pathogenicity Island Repressor Stl with Dimeric and Trimeric Phage dUTPases.

Nyíri K, Harris MJ, Matejka J, Ozohanics O, Vékey K, Borysik AJ, Vértessy BG. Nyíri K, et al. Among authors: borysik aj. Biomolecules. 2019 Sep 14;9(9):488. doi: 10.3390/biom9090488. Biomolecules. 2019. PMID: 31540005 Free PMC article.

4

Mapping HDX-MS Data to Protein Conformations through Training Ensemble-Based Models.

Salmas RE, Harris MJ, Borysik AJ. Salmas RE, et al. Among authors: borysik aj. J Am Soc Mass Spectrom. 2023 Sep 6;34(9):1989-1997. doi: 10.1021/jasms.3c00145. Epub 2023 Aug 7. J Am Soc Mass Spectrom. 2023. PMID: 37550799 Free PMC article.

5

Simulated Isotope Exchange Patterns Enable Protein Structure Determination.

Borysik AJ. Borysik AJ. Angew Chem Int Ed Engl. 2017 Aug 1;56(32):9396-9399. doi: 10.1002/anie.201704604. Epub 2017 Jul 5. Angew Chem Int Ed Engl. 2017. PMID: 28639732

6

Direct protein-lipid interactions shape the conformational landscape of secondary transporters.

Martens C, Shekhar M, Borysik AJ, Lau AM, Reading E, Tajkhorshid E, Booth PJ, Politis A. Martens C, et al. Among authors: borysik aj. Nat Commun. 2018 Oct 8;9(1):4151. doi: 10.1038/s41467-018-06704-1. Nat Commun. 2018. PMID: 30297844 Free PMC article.

7

HDXmodeller: an online webserver for high-resolution HDX-MS with auto-validation.

Salmas RE, Borysik AJ. Salmas RE, et al. Among authors: borysik aj. Commun Biol. 2021 Feb 15;4(1):199. doi: 10.1038/s42003-021-01709-x. Commun Biol. 2021. PMID: 33589746 Free PMC article.

8

Exploiting the Propagation of Constrained Variables for Enhanced HDX-MS Data Optimization.

Salmas RE, Borysik AJ. Salmas RE, et al. Among authors: borysik aj. Anal Chem. 2021 Dec 14;93(49):16417-16424. doi: 10.1021/acs.analchem.1c03082. Epub 2021 Dec 3. Anal Chem. 2021. PMID: 34860510

9

Deep Learning Enables Automatic Correction of Experimental HDX-MS Data with Applications in Protein Modeling.

Salmas RE, Borysik AJ. Salmas RE, et al. Among authors: borysik aj. J Am Soc Mass Spectrom. 2024 Feb 7;35(2):197-204. doi: 10.1021/jasms.3c00285. Epub 2024 Jan 23. J Am Soc Mass Spectrom. 2024. PMID: 38262924 Free PMC article.

10

Assembling the pieces of macromolecular complexes: Hybrid structural biology approaches.

Politis A, Borysik AJ. Politis A, et al. Among authors: borysik aj. Proteomics. 2015 Aug;15(16):2792-803. doi: 10.1002/pmic.201400507. Epub 2015 Apr 21. Proteomics. 2015. PMID: 25755146 Review.

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