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Improved Ribo-seq enables identification of cryptic translation events.
Erhard F, Halenius A, Zimmermann C, L'Hernault A, Kowalewski DJ, Weekes MP, Stevanovic S, Zimmer R, Dölken L. Erhard F, et al. Among authors: l hernault a, dolken l. Nat Methods. 2018 May;15(5):363-366. doi: 10.1038/nmeth.4631. Epub 2018 Mar 12. Nat Methods. 2018. PMID: 29529017 Free PMC article.
Systematic analysis of viral and cellular microRNA targets in cells latently infected with human gamma-herpesviruses by RISC immunoprecipitation assay.
Dölken L, Malterer G, Erhard F, Kothe S, Friedel CC, Suffert G, Marcinowski L, Motsch N, Barth S, Beitzinger M, Lieber D, Bailer SM, Hoffmann R, Ruzsics Z, Kremmer E, Pfeffer S, Zimmer R, Koszinowski UH, Grässer F, Meister G, Haas J. Dölken L, et al. Cell Host Microbe. 2010 Apr 22;7(4):324-334. doi: 10.1016/j.chom.2010.03.008. Cell Host Microbe. 2010. PMID: 20413099 Free article.
Degradation of cellular mir-27 by a novel, highly abundant viral transcript is important for efficient virus replication in vivo.
Marcinowski L, Tanguy M, Krmpotic A, Rädle B, Lisnić VJ, Tuddenham L, Chane-Woon-Ming B, Ruzsics Z, Erhard F, Benkartek C, Babic M, Zimmer R, Trgovcich J, Koszinowski UH, Jonjic S, Pfeffer S, Dölken L. Marcinowski L, et al. Among authors: dolken l. PLoS Pathog. 2012 Feb;8(2):e1002510. doi: 10.1371/journal.ppat.1002510. Epub 2012 Feb 9. PLoS Pathog. 2012. PMID: 22346748 Free PMC article.
Ultrashort and progressive 4sU-tagging reveals key characteristics of RNA processing at nucleotide resolution.
Windhager L, Bonfert T, Burger K, Ruzsics Z, Krebs S, Kaufmann S, Malterer G, L'Hernault A, Schilhabel M, Schreiber S, Rosenstiel P, Zimmer R, Eick D, Friedel CC, Dölken L. Windhager L, et al. Among authors: l hernault a, dolken l. Genome Res. 2012 Oct;22(10):2031-42. doi: 10.1101/gr.131847.111. Epub 2012 Apr 26. Genome Res. 2012. PMID: 22539649 Free PMC article.
Real-time transcriptional profiling of cellular and viral gene expression during lytic cytomegalovirus infection.
Marcinowski L, Lidschreiber M, Windhager L, Rieder M, Bosse JB, Rädle B, Bonfert T, Györy I, de Graaf M, Prazeres da Costa O, Rosenstiel P, Friedel CC, Zimmer R, Ruzsics Z, Dölken L. Marcinowski L, et al. Among authors: dolken l. PLoS Pathog. 2012 Sep;8(9):e1002908. doi: 10.1371/journal.ppat.1002908. Epub 2012 Sep 6. PLoS Pathog. 2012. PMID: 22969428 Free PMC article.
RIP-chip enrichment analysis.
Erhard F, Dölken L, Zimmer R. Erhard F, et al. Among authors: dolken l. Bioinformatics. 2013 Jan 1;29(1):77-83. doi: 10.1093/bioinformatics/bts631. Epub 2012 Oct 26. Bioinformatics. 2013. PMID: 23104891
117 results