Vandermarliere E - Search Results

1

The mutational landscape of MYCN, Lin28b and ALK^F1174L driven murine neuroblastoma mimics human disease.

De Wilde B, Beckers A, Lindner S, Kristina A, De Preter K, Depuydt P, Mestdagh P, Sante T, Lefever S, Hertwig F, Peng Z, Shi LM, Lee S, Vandermarliere E, Martens L, Menten B, Schramm A, Fischer M, Schulte J, Vandesompele J, Speleman F. De Wilde B, et al. Among authors: vandermarliere e. Oncotarget. 2017 Dec 22;9(9):8334-8349. doi: 10.18632/oncotarget.23614. eCollection 2018 Feb 2. Oncotarget. 2017. PMID: 29492199 Free PMC article.

2

Protein structure as a means to triage proposed PTM sites.

Vandermarliere E, Martens L. Vandermarliere E, et al. Proteomics. 2013 Mar;13(6):1028-35. doi: 10.1002/pmic.201200232. Epub 2013 Feb 4. Proteomics. 2013. PMID: 23172737

3

Predicting tryptic cleavage from proteomics data using decision tree ensembles.

Fannes T, Vandermarliere E, Schietgat L, Degroeve S, Martens L, Ramon J. Fannes T, et al. Among authors: vandermarliere e. J Proteome Res. 2013 May 3;12(5):2253-9. doi: 10.1021/pr4001114. Epub 2013 Apr 4. J Proteome Res. 2013. PMID: 23517142

4

Getting intimate with trypsin, the leading protease in proteomics.

Vandermarliere E, Mueller M, Martens L. Vandermarliere E, et al. Mass Spectrom Rev. 2013 Nov-Dec;32(6):453-65. doi: 10.1002/mas.21376. Epub 2013 Jun 15. Mass Spectrom Rev. 2013. PMID: 23775586 Review.

5

Unraveling the specificities of the different human methionine sulfoxide reductases.

Vandermarliere E, Ghesquière B, Jonckheere V, Gevaert K, Martens L. Vandermarliere E, et al. Proteomics. 2014 Sep;14(17-18):1990-8. doi: 10.1002/pmic.201300357. Epub 2014 May 28. Proteomics. 2014. PMID: 24737740

6

Resolution of protein structure by mass spectrometry.

Vandermarliere E, Stes E, Gevaert K, Martens L. Vandermarliere E, et al. Mass Spectrom Rev. 2016 Oct;35(6):653-665. doi: 10.1002/mas.21450. Epub 2014 Dec 23. Mass Spectrom Rev. 2016. PMID: 25536908 Review.

7

Scop3D: three-dimensional visualization of sequence conservation.

Vermeire T, Vermaere S, Schepens B, Saelens X, Van Gucht S, Martens L, Vandermarliere E. Vermeire T, et al. Among authors: vandermarliere e. Proteomics. 2015 Apr;15(8):1448-52. doi: 10.1002/pmic.201400354. Epub 2015 Mar 3. Proteomics. 2015. PMID: 25641949

8

An extra dimension in protein tagging by quantifying universal proteotypic peptides using targeted proteomics.

Vandemoortele G, Staes A, Gonnelli G, Samyn N, De Sutter D, Vandermarliere E, Timmerman E, Gevaert K, Martens L, Eyckerman S. Vandemoortele G, et al. Among authors: vandermarliere e. Sci Rep. 2016 Jun 6;6:27220. doi: 10.1038/srep27220. Sci Rep. 2016. PMID: 27264994 Free PMC article.

9

Methods to Calculate Spectrum Similarity.

Yilmaz Ş, Vandermarliere E, Martens L. Yilmaz Ş, et al. Among authors: vandermarliere e. Methods Mol Biol. 2017;1549:75-100. doi: 10.1007/978-1-4939-6740-7_7. Methods Mol Biol. 2017. PMID: 27975285

10

Cross-linked peptide identification: A computational forest of algorithms.

Yılmaz Ş, Shiferaw GA, Rayo J, Economou A, Martens L, Vandermarliere E. Yılmaz Ş, et al. Among authors: vandermarliere e. Mass Spectrom Rev. 2018 Nov;37(6):738-749. doi: 10.1002/mas.21559. Epub 2018 Mar 12. Mass Spectrom Rev. 2018. PMID: 29529716 Review.

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