Yang ZK - Search Results

1

The Populus holobiont: dissecting the effects of plant niches and genotype on the microbiome.

Cregger MA, Veach AM, Yang ZK, Crouch MJ, Vilgalys R, Tuskan GA, Schadt CW. Cregger MA, et al. Among authors: yang zk. Microbiome. 2018 Feb 12;6(1):31. doi: 10.1186/s40168-018-0413-8. Microbiome. 2018. PMID: 29433554 Free PMC article.

2

Microarray-based analysis of microbial community RNAs by whole-community RNA amplification.

Gao H, Yang ZK, Gentry TJ, Wu L, Schadt CW, Zhou J. Gao H, et al. Among authors: yang zk. Appl Environ Microbiol. 2007 Jan;73(2):563-71. doi: 10.1128/AEM.01771-06. Epub 2006 Nov 10. Appl Environ Microbiol. 2007. PMID: 17098911 Free PMC article.

3

Establishment and metabolic analysis of a model microbial community for understanding trophic and electron accepting interactions of subsurface anaerobic environments.

Miller LD, Mosher JJ, Venkateswaran A, Yang ZK, Palumbo AV, Phelps TJ, Podar M, Schadt CW, Keller M. Miller LD, et al. Among authors: yang zk. BMC Microbiol. 2010 May 24;10:149. doi: 10.1186/1471-2180-10-149. BMC Microbiol. 2010. PMID: 20497531 Free PMC article.

4

Distinct microbial communities within the endosphere and rhizosphere of Populus deltoides roots across contrasting soil types.

Gottel NR, Castro HF, Kerley M, Yang Z, Pelletier DA, Podar M, Karpinets T, Uberbacher E, Tuskan GA, Vilgalys R, Doktycz MJ, Schadt CW. Gottel NR, et al. Appl Environ Microbiol. 2011 Sep;77(17):5934-44. doi: 10.1128/AEM.05255-11. Epub 2011 Jul 15. Appl Environ Microbiol. 2011. PMID: 21764952 Free PMC article.

5

A limited microbial consortium is responsible for extended bioreduction of uranium in a contaminated aquifer.

Gihring TM, Zhang G, Brandt CC, Brooks SC, Campbell JH, Carroll S, Criddle CS, Green SJ, Jardine P, Kostka JE, Lowe K, Mehlhorn TL, Overholt W, Watson DB, Yang Z, Wu WM, Schadt CW. Gihring TM, et al. Appl Environ Microbiol. 2011 Sep;77(17):5955-65. doi: 10.1128/AEM.00220-11. Epub 2011 Jul 15. Appl Environ Microbiol. 2011. PMID: 21764967 Free PMC article.

6

Comparative metagenomic and rRNA microbial diversity characterization using archaeal and bacterial synthetic communities.

Shakya M, Quince C, Campbell JH, Yang ZK, Schadt CW, Podar M. Shakya M, et al. Among authors: yang zk. Environ Microbiol. 2013 Jun;15(6):1882-99. doi: 10.1111/1462-2920.12086. Epub 2013 Feb 6. Environ Microbiol. 2013. PMID: 23387867 Free PMC article.

7

A multifactor analysis of fungal and bacterial community structure in the root microbiome of mature Populus deltoides trees.

Shakya M, Gottel N, Castro H, Yang ZK, Gunter L, Labbé J, Muchero W, Bonito G, Vilgalys R, Tuskan G, Podar M, Schadt CW. Shakya M, et al. Among authors: yang zk. PLoS One. 2013 Oct 16;8(10):e76382. doi: 10.1371/journal.pone.0076382. eCollection 2013. PLoS One. 2013. PMID: 24146861 Free PMC article.

8

Microbial community stratification linked to utilization of carbohydrates and phosphorus limitation in a boreal peatland at Marcell Experimental Forest, Minnesota, USA.

Lin X, Tfaily MM, Steinweg JM, Chanton P, Esson K, Yang ZK, Chanton JP, Cooper W, Schadt CW, Kostka JE. Lin X, et al. Among authors: yang zk. Appl Environ Microbiol. 2014 Jun;80(11):3518-30. doi: 10.1128/AEM.00205-14. Epub 2014 Mar 28. Appl Environ Microbiol. 2014. PMID: 24682300 Free PMC article.

9

Two Poplar-Associated Bacterial Isolates Induce Additive Favorable Responses in a Constructed Plant-Microbiome System.

Timm CM, Pelletier DA, Jawdy SS, Gunter LE, Henning JA, Engle N, Aufrecht J, Gee E, Nookaew I, Yang Z, Lu TY, Tschaplinski TJ, Doktycz MJ, Tuskan GA, Weston DJ. Timm CM, et al. Front Plant Sci. 2016 Apr 26;7:497. doi: 10.3389/fpls.2016.00497. eCollection 2016. Front Plant Sci. 2016. PMID: 27200001 Free PMC article.

10

Enrichment of Root Endophytic Bacteria from Populus deltoides and Single-Cell-Genomics Analysis.

Utturkar SM, Cude WN, Robeson MS Jr, Yang ZK, Klingeman DM, Land ML, Allman SL, Lu TY, Brown SD, Schadt CW, Podar M, Doktycz MJ, Pelletier DA. Utturkar SM, et al. Among authors: yang zk. Appl Environ Microbiol. 2016 Aug 30;82(18):5698-708. doi: 10.1128/AEM.01285-16. Print 2016 Sep 15. Appl Environ Microbiol. 2016. PMID: 27422831 Free PMC article.

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