Stoffel K - Search Results

1

Reference quality assembly of the 3.5-Gb genome of Capsicum annuum from a single linked-read library.

Hulse-Kemp AM, Maheshwari S, Stoffel K, Hill TA, Jaffe D, Williams SR, Weisenfeld N, Ramakrishnan S, Kumar V, Shah P, Schatz MC, Church DM, Van Deynze A. Hulse-Kemp AM, et al. Among authors: stoffel k. Hortic Res. 2018 Jan 12;5:4. doi: 10.1038/s41438-017-0011-0. eCollection 2018. Hortic Res. 2018. PMID: 29423234 Free PMC article.

2

Diversity in conserved genes in tomato.

Van Deynze A, Stoffel K, Buell CR, Kozik A, Liu J, van der Knaap E, Francis D. Van Deynze A, et al. Among authors: stoffel k. BMC Genomics. 2007 Dec 18;8:465. doi: 10.1186/1471-2164-8-465. BMC Genomics. 2007. PMID: 18088428 Free PMC article.

3

Sampling nucleotide diversity in cotton.

Van Deynze A, Stoffel K, Lee M, Wilkins TA, Kozik A, Cantrell RG, Yu JZ, Kohel RJ, Stelly DM. Van Deynze A, et al. Among authors: stoffel k. BMC Plant Biol. 2009 Oct 20;9:125. doi: 10.1186/1471-2229-9-125. BMC Plant Biol. 2009. PMID: 19840401 Free PMC article.

4

Single nucleotide polymorphism discovery in elite North American potato germplasm.

Hamilton JP, Hansey CN, Whitty BR, Stoffel K, Massa AN, Van Deynze A, De Jong WS, Douches DS, Buell CR. Hamilton JP, et al. Among authors: stoffel k. BMC Genomics. 2011 Jun 9;12:302. doi: 10.1186/1471-2164-12-302. BMC Genomics. 2011. PMID: 21658273 Free PMC article.

5

Development and application of a 6.5 million feature Affymetrix Genechip® for massively parallel discovery of single position polymorphisms in lettuce (Lactuca spp.).

Stoffel K, van Leeuwen H, Kozik A, Caldwell D, Ashrafi H, Cui X, Tan X, Hill T, Reyes-Chin-Wo S, Truco MJ, Michelmore RW, Van Deynze A. Stoffel K, et al. BMC Genomics. 2012 May 14;13:185. doi: 10.1186/1471-2164-13-185. BMC Genomics. 2012. PMID: 22583801 Free PMC article.

6

De novo assembly of the pepper transcriptome (Capsicum annuum): a benchmark for in silico discovery of SNPs, SSRs and candidate genes.

Ashrafi H, Hill T, Stoffel K, Kozik A, Yao J, Chin-Wo SR, Van Deynze A. Ashrafi H, et al. Among authors: stoffel k. BMC Genomics. 2012 Oct 30;13:571. doi: 10.1186/1471-2164-13-571. BMC Genomics. 2012. PMID: 23110314 Free PMC article.

7

Identification of QTLs for capsaicinoids, fruit quality, and plant architecture-related traits in an interspecific Capsicum RIL population.

Yarnes SC, Ashrafi H, Reyes-Chin-Wo S, Hill TA, Stoffel KM, Van Deynze A. Yarnes SC, et al. Genome. 2013 Jan;56(1):61-74. doi: 10.1139/gen-2012-0083. Epub 2013 Jan 1. Genome. 2013. PMID: 23379339

8

Characterization of Capsicum annuum genetic diversity and population structure based on parallel polymorphism discovery with a 30K unigene Pepper GeneChip.

Hill TA, Ashrafi H, Reyes-Chin-Wo S, Yao J, Stoffel K, Truco MJ, Kozik A, Michelmore RW, Van Deynze A. Hill TA, et al. Among authors: stoffel k. PLoS One. 2013;8(2):e56200. doi: 10.1371/journal.pone.0056200. Epub 2013 Feb 8. PLoS One. 2013. PMID: 23409153 Free PMC article.

9

An Ultra-High-Density, Transcript-Based, Genetic Map of Lettuce.

Truco MJ, Ashrafi H, Kozik A, van Leeuwen H, Bowers J, Wo SR, Stoffel K, Xu H, Hill T, Van Deynze A, Michelmore RW. Truco MJ, et al. Among authors: stoffel k. G3 (Bethesda). 2013 Apr 9;3(4):617-631. doi: 10.1534/g3.112.004929. G3 (Bethesda). 2013. PMID: 23550116 Free PMC article.

10

Development and bin mapping of gene-associated interspecific SNPs for cotton (Gossypium hirsutum L.) introgression breeding efforts.

Hulse-Kemp AM, Ashrafi H, Zheng X, Wang F, Hoegenauer KA, Maeda AB, Yang SS, Stoffel K, Matvienko M, Clemons K, Udall JA, Van Deynze A, Jones DC, Stelly DM. Hulse-Kemp AM, et al. Among authors: stoffel k. BMC Genomics. 2014 Oct 30;15(1):945. doi: 10.1186/1471-2164-15-945. BMC Genomics. 2014. PMID: 25359292 Free PMC article.

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