Mirarab S - Search Results

1

DiscoVista: Interpretable visualizations of gene tree discordance.

Sayyari E, Whitfield JB, Mirarab S. Sayyari E, et al. Among authors: mirarab s. Mol Phylogenet Evol. 2018 May;122:110-115. doi: 10.1016/j.ympev.2018.01.019. Epub 2018 Feb 5. Mol Phylogenet Evol. 2018. PMID: 29421312

2

Evaluating Summary Methods for Multilocus Species Tree Estimation in the Presence of Incomplete Lineage Sorting.

Mirarab S, Bayzid MS, Warnow T. Mirarab S, et al. Syst Biol. 2016 May;65(3):366-80. doi: 10.1093/sysbio/syu063. Epub 2014 Aug 26. Syst Biol. 2016. PMID: 25164915

3

Fast Coalescent-Based Computation of Local Branch Support from Quartet Frequencies.

Sayyari E, Mirarab S. Sayyari E, et al. Among authors: mirarab s. Mol Biol Evol. 2016 Jul;33(7):1654-68. doi: 10.1093/molbev/msw079. Epub 2016 Apr 15. Mol Biol Evol. 2016. PMID: 27189547 Free PMC article.

4

Anchoring quartet-based phylogenetic distances and applications to species tree reconstruction.

Sayyari E, Mirarab S. Sayyari E, et al. Among authors: mirarab s. BMC Genomics. 2016 Nov 11;17(Suppl 10):783. doi: 10.1186/s12864-016-3098-z. BMC Genomics. 2016. PMID: 28185574 Free PMC article.

5

Minimum variance rooting of phylogenetic trees and implications for species tree reconstruction.

Mai U, Sayyari E, Mirarab S. Mai U, et al. Among authors: mirarab s. PLoS One. 2017 Aug 11;12(8):e0182238. doi: 10.1371/journal.pone.0182238. eCollection 2017. PLoS One. 2017. PMID: 28800608 Free PMC article.

6

Fragmentary Gene Sequences Negatively Impact Gene Tree and Species Tree Reconstruction.

Sayyari E, Whitfield JB, Mirarab S. Sayyari E, et al. Among authors: mirarab s. Mol Biol Evol. 2017 Dec 1;34(12):3279-3291. doi: 10.1093/molbev/msx261. Mol Biol Evol. 2017. PMID: 29029241

7

Testing for Polytomies in Phylogenetic Species Trees Using Quartet Frequencies.

Sayyari E, Mirarab S. Sayyari E, et al. Among authors: mirarab s. Genes (Basel). 2018 Feb 28;9(3):132. doi: 10.3390/genes9030132. Genes (Basel). 2018. PMID: 29495636 Free PMC article.

8

TreeShrink: fast and accurate detection of outlier long branches in collections of phylogenetic trees.

Mai U, Mirarab S. Mai U, et al. Among authors: mirarab s. BMC Genomics. 2018 May 8;19(Suppl 5):272. doi: 10.1186/s12864-018-4620-2. BMC Genomics. 2018. PMID: 29745847 Free PMC article.

9

ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees.

Zhang C, Rabiee M, Sayyari E, Mirarab S. Zhang C, et al. Among authors: mirarab s. BMC Bioinformatics. 2018 May 8;19(Suppl 6):153. doi: 10.1186/s12859-018-2129-y. BMC Bioinformatics. 2018. PMID: 29745866 Free PMC article.

10

Multi-allele species reconstruction using ASTRAL.

Rabiee M, Sayyari E, Mirarab S. Rabiee M, et al. Among authors: mirarab s. Mol Phylogenet Evol. 2019 Jan;130:286-296. doi: 10.1016/j.ympev.2018.10.033. Epub 2018 Oct 26. Mol Phylogenet Evol. 2019. PMID: 30393186

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