Alfonso-Prieto M - Search Results

1

Predicting ligand binding poses for low-resolution membrane protein models: Perspectives from multiscale simulations.

Schneider J, Korshunova K, Musiani F, Alfonso-Prieto M, Giorgetti A, Carloni P. Schneider J, et al. Biochem Biophys Res Commun. 2018 Mar 29;498(2):366-374. doi: 10.1016/j.bbrc.2018.01.160. Epub 2018 Feb 2. Biochem Biophys Res Commun. 2018. PMID: 29409902 Review.

2

Agonist Binding to Chemosensory Receptors: A Systematic Bioinformatics Analysis.

Fierro F, Suku E, Alfonso-Prieto M, Giorgetti A, Cichon S, Carloni P. Fierro F, et al. Front Mol Biosci. 2017 Sep 6;4:63. doi: 10.3389/fmolb.2017.00063. eCollection 2017. Front Mol Biosci. 2017. PMID: 28932739 Free PMC article.

3

Multiscale simulations on human Frizzled and Taste2 GPCRs.

Alfonso-Prieto M, Giorgetti A, Carloni P. Alfonso-Prieto M, et al. Curr Opin Struct Biol. 2019 Apr;55:8-16. doi: 10.1016/j.sbi.2019.02.009. Epub 2019 Mar 29. Curr Opin Struct Biol. 2019. PMID: 30933747 Review.

4

Understanding Ligand Binding to G-Protein Coupled Receptors Using Multiscale Simulations.

Alfonso-Prieto M, Navarini L, Carloni P. Alfonso-Prieto M, et al. Front Mol Biosci. 2019 May 3;6:29. doi: 10.3389/fmolb.2019.00029. eCollection 2019. Front Mol Biosci. 2019. PMID: 31131282 Free PMC article. Review.

5

Dual binding mode of "bitter sugars" to their human bitter taste receptor target.

Fierro F, Giorgetti A, Carloni P, Meyerhof W, Alfonso-Prieto M. Fierro F, et al. Sci Rep. 2019 Jun 11;9(1):8437. doi: 10.1038/s41598-019-44805-z. Sci Rep. 2019. PMID: 31186454 Free PMC article.

6

Ligand Pose Predictions for Human G Protein-Coupled Receptors: Insights from the Amber-Based Hybrid Molecular Mechanics/Coarse-Grained Approach.

Schneider J, Korshunova K, Si Chaib Z, Giorgetti A, Alfonso-Prieto M, Carloni P. Schneider J, et al. J Chem Inf Model. 2020 Oct 26;60(10):5103-5116. doi: 10.1021/acs.jcim.0c00661. Epub 2020 Aug 14. J Chem Inf Model. 2020. PMID: 32786708

7

Hybrid MM/CG Webserver: Automatic Set Up of Molecular Mechanics/Coarse-Grained Simulations for Human G Protein-Coupled Receptor/Ligand Complexes.

Schneider J, Ribeiro R, Alfonso-Prieto M, Carloni P, Giorgetti A. Schneider J, et al. Front Mol Biosci. 2020 Sep 4;7:576689. doi: 10.3389/fmolb.2020.576689. eCollection 2020. Front Mol Biosci. 2020. PMID: 33102525 Free PMC article.

8

Robust principal component analysis-based prediction of protein-protein interaction hot spots.

Sitani D, Giorgetti A, Alfonso-Prieto M, Carloni P. Sitani D, et al. Proteins. 2021 Jun;89(6):639-647. doi: 10.1002/prot.26047. Epub 2021 Feb 2. Proteins. 2021. PMID: 33458895

9

Mechanisms Underlying Proton Release in CLC-type F^-/H⁺ Antiporters.

Chiariello MG, Alfonso-Prieto M, Ippoliti E, Fahlke C, Carloni P. Chiariello MG, et al. J Phys Chem Lett. 2021 May 13;12(18):4415-4420. doi: 10.1021/acs.jpclett.1c00361. Epub 2021 May 5. J Phys Chem Lett. 2021. PMID: 33950673

10

Bitter Taste and Olfactory Receptors: Beyond Chemical Sensing in the Tongue and the Nose.

Alfonso-Prieto M. Alfonso-Prieto M. J Membr Biol. 2021 Aug;254(4):343-352. doi: 10.1007/s00232-021-00182-1. Epub 2021 Jun 25. J Membr Biol. 2021. PMID: 34173018 Free PMC article.

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