Stolovitzky G - Search Results

1

A flexible ontology for inference of emergent whole cell function from relationships between subcellular processes.

Hansen J, Meretzky D, Woldesenbet S, Stolovitzky G, Iyengar R. Hansen J, et al. Among authors: stolovitzky g. Sci Rep. 2017 Dec 18;7(1):17689. doi: 10.1038/s41598-017-16627-4. Sci Rep. 2017. PMID: 29255142 Free PMC article.

2

Formation of regulatory patterns during signal propagation in a Mammalian cellular network.

Ma'ayan A, Jenkins SL, Neves S, Hasseldine A, Grace E, Dubin-Thaler B, Eungdamrong NJ, Weng G, Ram PT, Rice JJ, Kershenbaum A, Stolovitzky GA, Blitzer RD, Iyengar R. Ma'ayan A, et al. Among authors: stolovitzky ga. Science. 2005 Aug 12;309(5737):1078-83. doi: 10.1126/science.1108876. Science. 2005. PMID: 16099987 Free PMC article.

3

Ordered cyclic motifs contribute to dynamic stability in biological and engineered networks.

Ma'ayan A, Cecchi GA, Wagner J, Rao AR, Iyengar R, Stolovitzky G. Ma'ayan A, et al. Among authors: stolovitzky g. Proc Natl Acad Sci U S A. 2008 Dec 9;105(49):19235-40. doi: 10.1073/pnas.0805344105. Epub 2008 Nov 25. Proc Natl Acad Sci U S A. 2008. PMID: 19033453 Free PMC article.

4

NeTFactor, a framework for identifying transcriptional regulators of gene expression-based biomarkers.

Ahsen ME, Chun Y, Grishin A, Grishina G, Stolovitzky G, Pandey G, Bunyavanich S. Ahsen ME, et al. Among authors: stolovitzky g. Sci Rep. 2019 Sep 10;9(1):12970. doi: 10.1038/s41598-019-49498-y. Sci Rep. 2019. PMID: 31506535 Free PMC article.

5

Dialogue on reverse-engineering assessment and methods: the DREAM of high-throughput pathway inference.

Stolovitzky G, Monroe D, Califano A. Stolovitzky G, et al. Ann N Y Acad Sci. 2007 Dec;1115:1-22. doi: 10.1196/annals.1407.021. Epub 2007 Oct 9. Ann N Y Acad Sci. 2007. PMID: 17925349 Review.

6

The challenges of systems biology. Preface.

Stolovitzky G, Kahlem P, Califano A. Stolovitzky G, et al. Ann N Y Acad Sci. 2009 Mar;1158:ix-xii. doi: 10.1111/j.1749-6632.2009.04470.x. Ann N Y Acad Sci. 2009. PMID: 19348626 No abstract available.

7

Towards a rigorous assessment of systems biology models: the DREAM3 challenges.

Prill RJ, Marbach D, Saez-Rodriguez J, Sorger PK, Alexopoulos LG, Xue X, Clarke ND, Altan-Bonnet G, Stolovitzky G. Prill RJ, et al. Among authors: stolovitzky g. PLoS One. 2010 Feb 23;5(2):e9202. doi: 10.1371/journal.pone.0009202. PLoS One. 2010. PMID: 20186320 Free PMC article.

8

Crowdsourcing network inference: the DREAM predictive signaling network challenge.

Prill RJ, Saez-Rodriguez J, Alexopoulos LG, Sorger PK, Stolovitzky G. Prill RJ, et al. Among authors: stolovitzky g. Sci Signal. 2011 Aug 30;4(189):mr7. doi: 10.1126/scisignal.2002212. Sci Signal. 2011. PMID: 21900204 Free PMC article.

9

Improving breast cancer survival analysis through competition-based multidimensional modeling.

Bilal E, Dutkowski J, Guinney J, Jang IS, Logsdon BA, Pandey G, Sauerwine BA, Shimoni Y, Moen Vollan HK, Mecham BH, Rueda OM, Tost J, Curtis C, Alvarez MJ, Kristensen VN, Aparicio S, Børresen-Dale AL, Caldas C, Califano A, Friend SH, Ideker T, Schadt EE, Stolovitzky GA, Margolin AA. Bilal E, et al. Among authors: stolovitzky ga. PLoS Comput Biol. 2013;9(5):e1003047. doi: 10.1371/journal.pcbi.1003047. Epub 2013 May 9. PLoS Comput Biol. 2013. PMID: 23671412 Free PMC article.

10

Regulating the transport of DNA through biofriendly nanochannels in a thin solid membrane.

Wang D, Harrer S, Luan B, Stolovitzky G, Peng H, Afzali-Ardakani A. Wang D, et al. Among authors: stolovitzky g. Sci Rep. 2014 Feb 5;4:3985. doi: 10.1038/srep03985. Sci Rep. 2014. PMID: 24496378 Free PMC article.

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