Pe'er D - Search Results

1

Regev A, Teichmann SA, Lander ES, Amit I, Benoist C, Birney E, Bodenmiller B, Campbell P, Carninci P, Clatworthy M, Clevers H, Deplancke B, Dunham I, Eberwine J, Eils R, Enard W, Farmer A, Fugger L, Göttgens B, Hacohen N, Haniffa M, Hemberg M, Kim S, Klenerman P, Kriegstein A, Lein E, Linnarsson S, Lundberg E, Lundeberg J, Majumder P, Marioni JC, Merad M, Mhlanga M, Nawijn M, Netea M, Nolan G, Pe'er D, Phillipakis A, Ponting CP, Quake S, Reik W, Rozenblatt-Rosen O, Sanes J, Satija R, Schumacher TN, Shalek A, Shapiro E, Sharma P, Shin JW, Stegle O, Stratton M, Stubbington MJT, Theis FJ, Uhlen M, van Oudenaarden A, Wagner A, Watt F, Weissman J, Wold B, Xavier R, Yosef N; Human Cell Atlas Meeting Participants. Regev A, et al. Elife. 2017 Dec 5;6:e27041. doi: 10.7554/eLife.27041. Elife. 2017. PMID: 29206104 Free PMC article.

2

Inferring subnetworks from perturbed expression profiles.

Pe'er D, Regev A, Elidan G, Friedman N. Pe'er D, et al. Bioinformatics. 2001;17 Suppl 1:S215-24. doi: 10.1093/bioinformatics/17.suppl_1.s215. Bioinformatics. 2001. PMID: 11473012

3

Minreg: inferring an active regulator set.

Pe'er D, Regev A, Tanay A. Pe'er D, et al. Bioinformatics. 2002;18 Suppl 1:S258-67. doi: 10.1093/bioinformatics/18.suppl_1.s258. Bioinformatics. 2002. PMID: 12169555

4

Causal protein-signaling networks derived from multiparameter single-cell data.

Sachs K, Perez O, Pe'er D, Lauffenburger DA, Nolan GP. Sachs K, et al. Science. 2005 Apr 22;308(5721):523-9. doi: 10.1126/science.1105809. Science. 2005. PMID: 15845847

5

Learning signaling network structures with sparsely distributed data.

Sachs K, Itani S, Carlisle J, Nolan GP, Pe'er D, Lauffenburger DA. Sachs K, et al. J Comput Biol. 2009 Feb;16(2):201-12. doi: 10.1089/cmb.2008.07TT. J Comput Biol. 2009. PMID: 19193145 Free PMC article.

6

Principles and strategies for developing network models in cancer.

Pe'er D, Hacohen N. Pe'er D, et al. Cell. 2011 Mar 18;144(6):864-73. doi: 10.1016/j.cell.2011.03.001. Cell. 2011. PMID: 21414479 Free PMC article.

7

Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum.

Bendall SC, Simonds EF, Qiu P, Amir el-AD, Krutzik PO, Finck R, Bruggner RV, Melamed R, Trejo A, Ornatsky OI, Balderas RS, Plevritis SK, Sachs K, Pe'er D, Tanner SD, Nolan GP. Bendall SC, et al. Science. 2011 May 6;332(6030):687-96. doi: 10.1126/science.1198704. Science. 2011. PMID: 21551058 Free PMC article.

8

Normalization of mass cytometry data with bead standards.

Finck R, Simonds EF, Jager A, Krishnaswamy S, Sachs K, Fantl W, Pe'er D, Nolan GP, Bendall SC. Finck R, et al. Cytometry A. 2013 May;83(5):483-94. doi: 10.1002/cyto.a.22271. Epub 2013 Mar 19. Cytometry A. 2013. PMID: 23512433 Free PMC article.

9

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia.

Amir el-AD, Davis KL, Tadmor MD, Simonds EF, Levine JH, Bendall SC, Shenfeld DK, Krishnaswamy S, Nolan GP, Pe'er D. Amir el-AD, et al. Nat Biotechnol. 2013 Jun;31(6):545-52. doi: 10.1038/nbt.2594. Epub 2013 May 19. Nat Biotechnol. 2013. PMID: 23685480 Free PMC article.

10

Genotype-environment interactions reveal causal pathways that mediate genetic effects on phenotype.

Gagneur J, Stegle O, Zhu C, Jakob P, Tekkedil MM, Aiyar RS, Schuon AK, Pe'er D, Steinmetz LM. Gagneur J, et al. PLoS Genet. 2013;9(9):e1003803. doi: 10.1371/journal.pgen.1003803. Epub 2013 Sep 19. PLoS Genet. 2013. PMID: 24068968 Free PMC article.

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