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OMSV enables accurate and comprehensive identification of large structural variations from nanochannel-based single-molecule optical maps.
Genome Biol. 2017 Dec 1;18(1):230. doi: 10.1186/s13059-017-1356-2.
Genome Biol. 2017.
PMID: 29195502
Free PMC article.
Genome-Wide Structural Variation Detection by Genome Mapping on Nanochannel Arrays.
Mak AC, Lai YY, Lam ET, Kwok TP, Leung AK, Poon A, Mostovoy Y, Hastie AR, Stedman W, Anantharaman T, Andrews W, Zhou X, Pang AW, Dai H, Chu C, Lin C, Wu JJ, Li CM, Li JW, Yim AK, Chan S, Sibert J, Džakula Ž, Cao H, Yiu SM, Chan TF, Yip KY, Xiao M, Kwok PY.
Mak AC, et al. Among authors: kwok tp.
Genetics. 2016 Jan;202(1):351-62. doi: 10.1534/genetics.115.183483. Epub 2015 Oct 28.
Genetics. 2016.
PMID: 26510793
Free PMC article.
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OMBlast: alignment tool for optical mapping using a seed-and-extend approach.
Leung AK, Kwok TP, Wan R, Xiao M, Kwok PY, Yip KY, Chan TF.
Leung AK, et al. Among authors: kwok tp.
Bioinformatics. 2017 Feb 1;33(3):311-319. doi: 10.1093/bioinformatics/btw620.
Bioinformatics. 2017.
PMID: 28172448
Free PMC article.
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