DiMaio F - Search Results

1

Structural basis for the initiation of eukaryotic transcription-coupled DNA repair.

Xu J, Lahiri I, Wang W, Wier A, Cianfrocco MA, Chong J, Hare AA, Dervan PB, DiMaio F, Leschziner AE, Wang D. Xu J, et al. Among authors: dimaio f. Nature. 2017 Nov 30;551(7682):653-657. doi: 10.1038/nature24658. Epub 2017 Nov 22. Nature. 2017. PMID: 29168508 Free PMC article.

2

Improved molecular replacement by density- and energy-guided protein structure optimization.

DiMaio F, Terwilliger TC, Read RJ, Wlodawer A, Oberdorfer G, Wagner U, Valkov E, Alon A, Fass D, Axelrod HL, Das D, Vorobiev SM, Iwaï H, Pokkuluri PR, Baker D. DiMaio F, et al. Nature. 2011 May 26;473(7348):540-3. doi: 10.1038/nature09964. Epub 2011 May 1. Nature. 2011. PMID: 21532589 Free PMC article.

3

Improved low-resolution crystallographic refinement with Phenix and Rosetta.

DiMaio F, Echols N, Headd JJ, Terwilliger TC, Adams PD, Baker D. DiMaio F, et al. Nat Methods. 2013 Nov;10(11):1102-4. doi: 10.1038/nmeth.2648. Epub 2013 Sep 29. Nat Methods. 2013. PMID: 24076763 Free PMC article.

4

De novo protein structure determination from near-atomic-resolution cryo-EM maps.

Wang RY, Kudryashev M, Li X, Egelman EH, Basler M, Cheng Y, Baker D, DiMaio F. Wang RY, et al. Among authors: dimaio f. Nat Methods. 2015 Apr;12(4):335-8. doi: 10.1038/nmeth.3287. Epub 2015 Feb 23. Nat Methods. 2015. PMID: 25707029 Free PMC article.

5

Atomic-accuracy models from 4.5-Å cryo-electron microscopy data with density-guided iterative local refinement.

DiMaio F, Song Y, Li X, Brunner MJ, Xu C, Conticello V, Egelman E, Marlovits T, Cheng Y, Baker D. DiMaio F, et al. Nat Methods. 2015 Apr;12(4):361-365. doi: 10.1038/nmeth.3286. Epub 2015 Feb 23. Nat Methods. 2015. PMID: 25707030 Free PMC article.

6

The molecular basis for flexibility in the flexible filamentous plant viruses.

DiMaio F, Chen CC, Yu X, Frenz B, Hsu YH, Lin NS, Egelman EH. DiMaio F, et al. Nat Struct Mol Biol. 2015 Aug;22(8):642-4. doi: 10.1038/nsmb.3054. Epub 2015 Jul 13. Nat Struct Mol Biol. 2015. PMID: 26167882 Free PMC article.

7

EMRinger: side chain-directed model and map validation for 3D cryo-electron microscopy.

Barad BA, Echols N, Wang RY, Cheng Y, DiMaio F, Adams PD, Fraser JS. Barad BA, et al. Among authors: dimaio f. Nat Methods. 2015 Oct;12(10):943-6. doi: 10.1038/nmeth.3541. Epub 2015 Aug 17. Nat Methods. 2015. PMID: 26280328 Free PMC article.

8

Cryo-electron microscopy structure of a coronavirus spike glycoprotein trimer.

Walls AC, Tortorici MA, Bosch BJ, Frenz B, Rottier PJM, DiMaio F, Rey FA, Veesler D. Walls AC, et al. Among authors: dimaio f. Nature. 2016 Mar 3;531(7592):114-117. doi: 10.1038/nature16988. Epub 2016 Feb 8. Nature. 2016. PMID: 26855426 Free PMC article.

9

RosettaES: a sampling strategy enabling automated interpretation of difficult cryo-EM maps.

Frenz B, Walls AC, Egelman EH, Veesler D, DiMaio F. Frenz B, et al. Among authors: dimaio f. Nat Methods. 2017 Aug;14(8):797-800. doi: 10.1038/nmeth.4340. Epub 2017 Jun 19. Nat Methods. 2017. PMID: 28628127 Free PMC article.

10

Cryo-EM structure of the protein-conducting ERAD channel Hrd1 in complex with Hrd3.

Schoebel S, Mi W, Stein A, Ovchinnikov S, Pavlovicz R, DiMaio F, Baker D, Chambers MG, Su H, Li D, Rapoport TA, Liao M. Schoebel S, et al. Among authors: dimaio f. Nature. 2017 Aug 17;548(7667):352-355. doi: 10.1038/nature23314. Epub 2017 Jul 6. Nature. 2017. PMID: 28682307 Free PMC article.

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