Zhang Y - Search Results

1

The structure of the large regulatory α subunit of phosphorylase kinase examined by modeling and hydrogen-deuterium exchange.

Rimmer MA, Nadeau OW, Yang J, Artigues A, Zhang Y, Carlson GM. Rimmer MA, et al. Among authors: zhang y. Protein Sci. 2018 Feb;27(2):472-484. doi: 10.1002/pro.3339. Epub 2017 Nov 21. Protein Sci. 2018. PMID: 29098725 Free PMC article.

2

Monte Carlo refinement of rigid-body protein docking structures with backbone displacement and side-chain optimization.

Lorenzen S, Zhang Y. Lorenzen S, et al. Among authors: zhang y. Protein Sci. 2007 Dec;16(12):2716-25. doi: 10.1110/ps.072847207. Epub 2007 Oct 26. Protein Sci. 2007. PMID: 17965193 Free PMC article.

3

COFACTOR: an accurate comparative algorithm for structure-based protein function annotation.

Roy A, Yang J, Zhang Y. Roy A, et al. Among authors: zhang y. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W471-7. doi: 10.1093/nar/gks372. Epub 2012 May 8. Nucleic Acids Res. 2012. PMID: 22570420 Free PMC article.

4

Structure and location of the regulatory β subunits in the (αβγδ)4 phosphorylase kinase complex.

Nadeau OW, Lane LA, Xu D, Sage J, Priddy TS, Artigues A, Villar MT, Yang Q, Robinson CV, Zhang Y, Carlson GM. Nadeau OW, et al. Among authors: zhang y. J Biol Chem. 2012 Oct 26;287(44):36651-61. doi: 10.1074/jbc.M112.412874. Epub 2012 Sep 11. J Biol Chem. 2012. PMID: 22969083 Free PMC article.

5

BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions.

Yang J, Roy A, Zhang Y. Yang J, et al. Among authors: zhang y. Nucleic Acids Res. 2013 Jan;41(Database issue):D1096-103. doi: 10.1093/nar/gks966. Epub 2012 Oct 18. Nucleic Acids Res. 2013. PMID: 23087378 Free PMC article.

6

A small shared epitope-mimetic compound potently accelerates osteoclast-mediated bone damage in autoimmune arthritis.

Fu J, Ling S, Liu Y, Yang J, Naveh S, Hannah M, Gilon C, Zhang Y, Holoshitz J. Fu J, et al. Among authors: zhang y. J Immunol. 2013 Sep 1;191(5):2096-103. doi: 10.4049/jimmunol.1203231. Epub 2013 Jul 24. J Immunol. 2013. PMID: 23885107 Free PMC article.

7

Protein-ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment.

Yang J, Roy A, Zhang Y. Yang J, et al. Among authors: zhang y. Bioinformatics. 2013 Oct 15;29(20):2588-95. doi: 10.1093/bioinformatics/btt447. Epub 2013 Aug 23. Bioinformatics. 2013. PMID: 23975762 Free PMC article.

8

A comparative assessment and analysis of 20 representative sequence alignment methods for protein structure prediction.

Yan R, Xu D, Yang J, Walker S, Zhang Y. Yan R, et al. Among authors: zhang y. Sci Rep. 2013;3:2619. doi: 10.1038/srep02619. Sci Rep. 2013. PMID: 24018415 Free PMC article.

9

Histatin 5 binds to Porphyromonas gingivalis hemagglutinin B (HagB) and alters HagB-induced chemokine responses.

Borgwardt DS, Martin AD, Van Hemert JR, Yang J, Fischer CL, Recker EN, Nair PR, Vidva R, Chandrashekaraiah S, Progulske-Fox A, Drake D, Cavanaugh JE, Vali S, Zhang Y, Brogden KA. Borgwardt DS, et al. Among authors: zhang y. Sci Rep. 2014 Jan 29;4:3904. doi: 10.1038/srep03904. Sci Rep. 2014. PMID: 24473528 Free PMC article.

10

Super Spy variants implicate flexibility in chaperone action.

Quan S, Wang L, Petrotchenko EV, Makepeace KA, Horowitz S, Yang J, Zhang Y, Borchers CH, Bardwell JC. Quan S, et al. Among authors: zhang y. Elife. 2014;3:e01584. doi: 10.7554/eLife.01584. Epub 2014 Feb 4. Elife. 2014. PMID: 24497545 Free PMC article.

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