Stütz AM - Search Results

1

Systematic Identification of Determinants for Single-Strand Annealing-Mediated Deletion Formation in Saccharomyces cerevisiae.

Segura-Wang M, Onishi-Seebacher M, Stütz AM, Mardin BR, Korbel JO. Segura-Wang M, et al. Among authors: stutz am. G3 (Bethesda). 2017 Oct 5;7(10):3269-3279. doi: 10.1534/g3.117.300165. G3 (Bethesda). 2017. PMID: 28818866 Free PMC article.

2

DELLY: structural variant discovery by integrated paired-end and split-read analysis.

Rausch T, Zichner T, Schlattl A, Stütz AM, Benes V, Korbel JO. Rausch T, et al. Among authors: stutz am. Bioinformatics. 2012 Sep 15;28(18):i333-i339. doi: 10.1093/bioinformatics/bts378. Bioinformatics. 2012. PMID: 22962449 Free PMC article.

3

Impact of genomic structural variation in Drosophila melanogaster based on population-scale sequencing.

Zichner T, Garfield DA, Rausch T, Stütz AM, Cannavó E, Braun M, Furlong EE, Korbel JO. Zichner T, et al. Among authors: stutz am. Genome Res. 2013 Mar;23(3):568-79. doi: 10.1101/gr.142646.112. Epub 2012 Dec 6. Genome Res. 2013. PMID: 23222910 Free PMC article.

4

The genomic and transcriptomic landscape of a HeLa cell line.

Landry JJ, Pyl PT, Rausch T, Zichner T, Tekkedil MM, Stütz AM, Jauch A, Aiyar RS, Pau G, Delhomme N, Gagneur J, Korbel JO, Huber W, Steinmetz LM. Landry JJ, et al. Among authors: stutz am. G3 (Bethesda). 2013 Aug 7;3(8):1213-24. doi: 10.1534/g3.113.005777. G3 (Bethesda). 2013. PMID: 23550136 Free PMC article.

5

A cell-based model system links chromothripsis with hyperploidy.

Mardin BR, Drainas AP, Waszak SM, Weischenfeldt J, Isokane M, Stütz AM, Raeder B, Efthymiopoulos T, Buccitelli C, Segura-Wang M, Northcott P, Pfister SM, Lichter P, Ellenberg J, Korbel JO. Mardin BR, et al. Among authors: stutz am. Mol Syst Biol. 2015 Sep 28;11(9):828. doi: 10.15252/msb.20156505. Mol Syst Biol. 2015. PMID: 26415501 Free PMC article.

6

Immortalization capacity of HPV types is inversely related to chromosomal instability.

Schütze DM, Krijgsman O, Snijders PJ, Ylstra B, Weischenfeldt J, Mardin BR, Stütz AM, Korbel JO, de Winter JP, Meijer CJ, Quint WG, Bosch L, Wilting SM, Steenbergen RD. Schütze DM, et al. Among authors: stutz am. Oncotarget. 2016 Jun 21;7(25):37608-37621. doi: 10.18632/oncotarget.8058. Oncotarget. 2016. PMID: 26993771 Free PMC article.

7

Genome-wide Screens Implicate Loss of Cullin Ring Ligase 3 in Persistent Proliferation and Genome Instability in TP53-Deficient Cells.

Drainas AP, Lambuta RA, Ivanova I, Serçin Ö, Sarropoulos I, Smith ML, Efthymiopoulos T, Raeder B, Stütz AM, Waszak SM, Mardin BR, Korbel JO. Drainas AP, et al. Among authors: stutz am. Cell Rep. 2020 Apr 7;31(1):107465. doi: 10.1016/j.celrep.2020.03.029. Cell Rep. 2020. PMID: 32268084 Free PMC article.

8

A scalable CRISPR/Cas9-based fluorescent reporter assay to study DNA double-strand break repair choice.

Roidos P, Sungalee S, Benfatto S, Serçin Ö, Stütz AM, Abdollahi A, Mauer J, Zenke FT, Korbel JO, Mardin BR. Roidos P, et al. Among authors: stutz am. Nat Commun. 2020 Aug 14;11(1):4077. doi: 10.1038/s41467-020-17962-3. Nat Commun. 2020. PMID: 32796846 Free PMC article.

9

Somatic structural variant formation is guided by and influences genome architecture.

Sidiropoulos N, Mardin BR, Rodríguez-González FG, Bochkov ID, Garg S, Stütz AM, Korbel JO, Aiden EL, Weischenfeldt J. Sidiropoulos N, et al. Among authors: stutz am. Genome Res. 2022 Apr;32(4):643-655. doi: 10.1101/gr.275790.121. Epub 2022 Feb 17. Genome Res. 2022. PMID: 35177558 Free PMC article.

10

Comprehensive characterization of complex structural variations in cancer by directly comparing genome sequence reads.

Moncunill V, Gonzalez S, Beà S, Andrieux LO, Salaverria I, Royo C, Martinez L, Puiggròs M, Segura-Wang M, Stütz AM, Navarro A, Royo R, Gelpí JL, Gut IG, López-Otín C, Orozco M, Korbel JO, Campo E, Puente XS, Torrents D. Moncunill V, et al. Among authors: stutz am. Nat Biotechnol. 2014 Nov;32(11):1106-12. doi: 10.1038/nbt.3027. Epub 2014 Oct 26. Nat Biotechnol. 2014. PMID: 25344728

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