Bian Y - Search Results

1

Unexpected Position-Dependent Effects of Ribose G-Quartets in G-Quadruplexes.

Zhou J, Amrane S, Rosu F, Salgado GF, Bian Y, Tateishi-Karimata H, Largy E, Korkut DN, Bourdoncle A, Miyoshi D, Zhang J, Ju H, Wang W, Sugimoto N, Gabelica V, Mergny JL. Zhou J, et al. Among authors: bian y. J Am Chem Soc. 2017 Jun 14;139(23):7768-7779. doi: 10.1021/jacs.7b00648. Epub 2017 Jun 5. J Am Chem Soc. 2017. PMID: 28523907

2

RNA fragment modeling with a nucleobase discrete-state model.

Zhang J, Bian Y, Lin H, Wang W. Zhang J, et al. Among authors: bian y. Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Feb;85(2 Pt 1):021909. doi: 10.1103/PhysRevE.85.021909. Epub 2012 Feb 14. Phys Rev E Stat Nonlin Soft Matter Phys. 2012. PMID: 22463246

3

Atomistic picture for the folding pathway of a hybrid-1 type human telomeric DNA G-quadruplex.

Bian Y, Tan C, Wang J, Sheng Y, Zhang J, Wang W. Bian Y, et al. PLoS Comput Biol. 2014 Apr 10;10(4):e1003562. doi: 10.1371/journal.pcbi.1003562. eCollection 2014 Apr. PLoS Comput Biol. 2014. PMID: 24722458 Free PMC article.

4

Free energy landscape and multiple folding pathways of an H-type RNA pseudoknot.

Bian Y, Zhang J, Wang J, Wang J, Wang W. Bian Y, et al. PLoS One. 2015 Jun 1;10(6):e0129089. doi: 10.1371/journal.pone.0129089. eCollection 2015. PLoS One. 2015. PMID: 26030098 Free PMC article.

5

Exploration of the folding dynamics of human telomeric G-quadruplex with a hybrid atomistic structure-based model.

Bian Y, Ren W, Song F, Yu J, Wang J. Bian Y, et al. J Chem Phys. 2018 May 28;148(20):204107. doi: 10.1063/1.5028498. J Chem Phys. 2018. PMID: 29865833

6

Insights into the Kinetic Partitioning Folding Dynamics of the Human Telomeric G-Quadruplex from Molecular Simulations and Machine Learning.

Bian Y, Song F, Zhang J, Yu J, Wang J, Wang W. Bian Y, et al. J Chem Theory Comput. 2020 Sep 8;16(9):5936-5947. doi: 10.1021/acs.jctc.0c00340. Epub 2020 Aug 25. J Chem Theory Comput. 2020. PMID: 32794754

7

Bidirectional Allostery Mechanism in Catch-Bond Formation of CD44 Mediated Cell Adhesion.

Guan X, Bian Y, Guo Z, Zhang J, Cao Y, Li W, Wang W. Guan X, et al. Among authors: bian y. J Phys Chem Lett. 2024 Oct 31;15(43):10786-10794. doi: 10.1021/acs.jpclett.4c02598. Epub 2024 Oct 21. J Phys Chem Lett. 2024. PMID: 39432012

8

Effect of Pregenomic RNA on the Mechanical Stability of HBV Capsid by Coarse-Grained Molecular Simulations.

He Y, Gu T, Bian Y, Li W, Wang W. He Y, et al. Among authors: bian y. J Phys Chem B. 2024 Nov 28;128(47):11565-11572. doi: 10.1021/acs.jpcb.4c05060. Epub 2024 Nov 13. J Phys Chem B. 2024. PMID: 39538373

9

Atomistic Analysis of ToxN and ToxI Complex Unbinding Mechanism.

Hu G, Yu X, Bian Y, Cao Z, Xu S, Zhao L, Ji B, Wang W, Wang J. Hu G, et al. Among authors: bian y. Int J Mol Sci. 2018 Nov 9;19(11):3524. doi: 10.3390/ijms19113524. Int J Mol Sci. 2018. PMID: 30423909 Free PMC article.

10

Fusion Dynamics and Size-Dependence of Droplet Microstructure in ssDNA-Mediated Protein Phase Separation.

Bian Y, Lv F, Pan H, Ren W, Zhang W, Wang Y, Cao Y, Li W, Wang W. Bian Y, et al. JACS Au. 2024 Sep 4;4(9):3690-3704. doi: 10.1021/jacsau.4c00690. eCollection 2024 Sep 23. JACS Au. 2024. PMID: 39328748 Free PMC article.

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