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Accurate predictions of population-level changes in sequence and structural properties of HIV-1 Env using a volatility-controlled diffusion model.
DeLeon O, Hodis H, O'Malley Y, Johnson J, Salimi H, Zhai Y, Winter E, Remec C, Eichelberger N, Van Cleave B, Puliadi R, Harrington RD, Stapleton JT, Haim H. DeLeon O, et al. PLoS Biol. 2017 Apr 6;15(4):e2001549. doi: 10.1371/journal.pbio.2001549. eCollection 2017 Apr. PLoS Biol. 2017. PMID: 28384158 Free PMC article.
A metagenome-assembled genome inventory for children reveals early-life gut bacteriome and virome dynamics.
Peng Y, Zhu J, Wang S, Liu Y, Liu X, DeLeon O, Zhu W, Xu Z, Zhang X, Zhao S, Liang S, Li H, Ho B, Ching JY, Cheung CP, Leung TF, Tam WH, Leung TY, Chang EB, Chan FKL, Zhang L, Ng SC, Tun HM. Peng Y, et al. Among authors: deleon o. Cell Host Microbe. 2024 Dec 11;32(12):2212-2230.e8. doi: 10.1016/j.chom.2024.10.017. Epub 2024 Nov 25. Cell Host Microbe. 2024. PMID: 39591974
Gut microbes and the liver circadian clock partition glucose and lipid metabolism.
Frazier K, Manzoor S, Carroll K, DeLeon O, Miyoshi S, Miyoshi J, St George M, Tan A, Chrisler EA, Izumo M, Takahashi JS, Rao MC, Leone VA, Chang EB. Frazier K, et al. Among authors: deleon o. J Clin Invest. 2023 Sep 15;133(18):e162515. doi: 10.1172/JCI162515. J Clin Invest. 2023. PMID: 37712426 Free PMC article.
Dynamic genetic adaptation of Bacteroides thetaiotaomicron during murine gut colonization.
Kennedy MS, Zhang M, DeLeon O, Bissell J, Trigodet F, Lolans K, Temelkova S, Carroll KT, Fiebig A, Deutschbauer A, Sidebottom AM, Lake J, Henry C, Rice PA, Bergelson J, Chang EB. Kennedy MS, et al. Among authors: deleon o. Cell Rep. 2023 Aug 29;42(8):113009. doi: 10.1016/j.celrep.2023.113009. Epub 2023 Aug 21. Cell Rep. 2023. PMID: 37598339 Free PMC article.
Imbalanced gut microbiota predicts and drives the progression of nonalcoholic fatty liver disease and nonalcoholic steatohepatitis in a fast-food diet mouse model.
Fei N, Miyoshi S, Hermanson JB, Miyoshi J, Xie B, DeLeon O, Hawkins M, Charlton W, D'Souza M, Hart J, Sulakhe D, Martinez-Guryn KB, Chang EB, Charlton MR, Leone VA. Fei N, et al. Among authors: deleon o. bioRxiv [Preprint]. 2023 Jan 9:2023.01.09.523249. doi: 10.1101/2023.01.09.523249. bioRxiv. 2023. PMID: 36712061 Free PMC article. Preprint.
22 results