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3,171 results

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The identification and functional annotation of RNA structures conserved in vertebrates.
Seemann SE, Mirza AH, Hansen C, Bang-Berthelsen CH, Garde C, Christensen-Dalsgaard M, Torarinsson E, Yao Z, Workman CT, Pociot F, Nielsen H, Tommerup N, Ruzzo WL, Gorodkin J. Seemann SE, et al. Among authors: nielsen h. Genome Res. 2017 Aug;27(8):1371-1383. doi: 10.1101/gr.208652.116. Epub 2017 May 9. Genome Res. 2017. PMID: 28487280 Free PMC article.
Sequence and expression analysis of gaps in human chromosome 20.
Minocherhomji S, Seemann S, Mang Y, El-Schich Z, Bak M, Hansen C, Papadopoulos N, Josefsen K, Nielsen H, Gorodkin J, Tommerup N, Silahtaroglu A. Minocherhomji S, et al. Among authors: nielsen h. Nucleic Acids Res. 2012 Aug;40(14):6660-72. doi: 10.1093/nar/gks302. Epub 2012 Apr 17. Nucleic Acids Res. 2012. PMID: 22510267 Free PMC article.
Profiling of ribose methylations in RNA by high-throughput sequencing.
Birkedal U, Christensen-Dalsgaard M, Krogh N, Sabarinathan R, Gorodkin J, Nielsen H. Birkedal U, et al. Among authors: nielsen h. Angew Chem Int Ed Engl. 2015 Jan 7;54(2):451-5. doi: 10.1002/anie.201408362. Epub 2014 Nov 21. Angew Chem Int Ed Engl. 2015. PMID: 25417815
Optimizing RNA structures by sequence extensions using RNAcop.
Hecker N, Christensen-Dalsgaard M, Seemann SE, Havgaard JH, Stadler PF, Hofacker IL, Nielsen H, Gorodkin J. Hecker N, et al. Among authors: nielsen h. Nucleic Acids Res. 2015 Sep 30;43(17):8135-45. doi: 10.1093/nar/gkv813. Epub 2015 Aug 17. Nucleic Acids Res. 2015. PMID: 26283181 Free PMC article.
RNA 3D Modules in Genome-Wide Predictions of RNA 2D Structure.
Theis C, Zirbel CL, Zu Siederdissen CH, Anthon C, Hofacker IL, Nielsen H, Gorodkin J. Theis C, et al. Among authors: nielsen h. PLoS One. 2015 Oct 28;10(10):e0139900. doi: 10.1371/journal.pone.0139900. eCollection 2015. PLoS One. 2015. PMID: 26509713 Free PMC article.
RRP7A links primary microcephaly to dysfunction of ribosome biogenesis, resorption of primary cilia, and neurogenesis.
Farooq M, Lindbæk L, Krogh N, Doganli C, Keller C, Mönnich M, Gonçalves AB, Sakthivel S, Mang Y, Fatima A, Andersen VS, Hussain MS, Eiberg H, Hansen L, Kjaer KW, Gopalakrishnan J, Pedersen LB, Møllgård K, Nielsen H, Baig SM, Tommerup N, Christensen ST, Larsen LA. Farooq M, et al. Among authors: nielsen h. Nat Commun. 2020 Nov 16;11(1):5816. doi: 10.1038/s41467-020-19658-0. Nat Commun. 2020. PMID: 33199730 Free PMC article.
Group I introns: Moving in new directions.
Nielsen H, Johansen SD. Nielsen H, et al. RNA Biol. 2009 Sep-Oct;6(4):375-83. doi: 10.4161/rna.6.4.9334. Epub 2009 Sep 23. RNA Biol. 2009. PMID: 19667762 Free article. Review.
The transcriptional landscape.
Nielsen H. Nielsen H. Methods Mol Biol. 2011;703:3-14. doi: 10.1007/978-1-59745-248-9_1. Methods Mol Biol. 2011. PMID: 21125479 Review.
3,171 results