Chou WC - Search Results

1

SeqTU: A Web Server for Identification of Bacterial Transcription Units.

Chen X, Chou WC, Ma Q, Xu Y. Chen X, et al. Among authors: chou wc. Sci Rep. 2017 Mar 7;7:43925. doi: 10.1038/srep43925. Sci Rep. 2017. PMID: 28266571 Free PMC article.

2

Analysis of strand-specific RNA-seq data using machine learning reveals the structures of transcription units in Clostridium thermocellum.

Chou WC, Ma Q, Yang S, Cao S, Klingeman DM, Brown SD, Xu Y. Chou WC, et al. Nucleic Acids Res. 2015 May 26;43(10):e67. doi: 10.1093/nar/gkv177. Epub 2015 Mar 12. Nucleic Acids Res. 2015. PMID: 25765651 Free PMC article.

3

GolgiP: prediction of Golgi-resident proteins in plants.

Chou WC, Yin Y, Xu Y. Chou WC, et al. Bioinformatics. 2010 Oct 1;26(19):2464-5. doi: 10.1093/bioinformatics/btq446. Epub 2010 Aug 23. Bioinformatics. 2010. PMID: 20733061 Free PMC article.

4

rSeqTU-A Machine-Learning Based R Package for Prediction of Bacterial Transcription Units.

Niu SY, Liu B, Ma Q, Chou WC. Niu SY, et al. Among authors: chou wc. Front Genet. 2019 May 15;10:374. doi: 10.3389/fgene.2019.00374. eCollection 2019. Front Genet. 2019. PMID: 31156694 Free PMC article.

5

A novel computational framework for genome-scale alternative transcription units prediction.

Wang Q, Liu Z, Yan B, Chou WC, Ettwiller L, Ma Q, Liu B. Wang Q, et al. Among authors: chou wc. Brief Bioinform. 2021 Nov 5;22(6):bbab162. doi: 10.1093/bib/bbab162. Brief Bioinform. 2021. PMID: 33957668

6

An integrated transcriptomic and computational analysis for biomarker identification in gastric cancer.

Cui J, Chen Y, Chou WC, Sun L, Chen L, Suo J, Ni Z, Zhang M, Kong X, Hoffman LL, Kang J, Su Y, Olman V, Johnson D, Tench DW, Amster IJ, Orlando R, Puett D, Li F, Xu Y. Cui J, et al. Among authors: chou wc. Nucleic Acids Res. 2011 Mar;39(4):1197-207. doi: 10.1093/nar/gkq960. Epub 2010 Oct 21. Nucleic Acids Res. 2011. PMID: 20965966 Free PMC article.

7

Comprehensive characterization of the genomic alterations in human gastric cancer.

Cui J, Yin Y, Ma Q, Wang G, Olman V, Zhang Y, Chou WC, Hong CS, Zhang C, Cao S, Mao X, Li Y, Qin S, Zhao S, Jiang J, Hastings P, Li F, Xu Y. Cui J, et al. Among authors: chou wc. Int J Cancer. 2015 Jul 1;137(1):86-95. doi: 10.1002/ijc.29352. Epub 2014 Dec 3. Int J Cancer. 2015. PMID: 25422082 Free PMC article.

8

Insights into plant biomass conversion from the genome of the anaerobic thermophilic bacterium Caldicellulosiruptor bescii DSM 6725.

Dam P, Kataeva I, Yang SJ, Zhou F, Yin Y, Chou W, Poole FL 2nd, Westpheling J, Hettich R, Giannone R, Lewis DL, Kelly R, Gilbert HJ, Henrissat B, Xu Y, Adams MW. Dam P, et al. Nucleic Acids Res. 2011 Apr;39(8):3240-54. doi: 10.1093/nar/gkq1281. Epub 2011 Jan 11. Nucleic Acids Res. 2011. PMID: 21227922 Free PMC article.

9

Genome sequence of the anaerobic, thermophilic, and cellulolytic bacterium "Anaerocellum thermophilum" DSM 6725.

Kataeva IA, Yang SJ, Dam P, Poole FL 2nd, Yin Y, Zhou F, Chou WC, Xu Y, Goodwin L, Sims DR, Detter JC, Hauser LJ, Westpheling J, Adams MW. Kataeva IA, et al. Among authors: chou wc. J Bacteriol. 2009 Jun;191(11):3760-1. doi: 10.1128/JB.00256-09. Epub 2009 Apr 3. J Bacteriol. 2009. PMID: 19346307 Free PMC article.

10

Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.).

Zhang JY, Lee YC, Torres-Jerez I, Wang M, Yin Y, Chou WC, He J, Shen H, Srivastava AC, Pennacchio C, Lindquist E, Grimwood J, Schmutz J, Xu Y, Sharma M, Sharma R, Bartley LE, Ronald PC, Saha MC, Dixon RA, Tang Y, Udvardi MK. Zhang JY, et al. Among authors: chou wc. Plant J. 2013 Apr;74(1):160-73. doi: 10.1111/tpj.12104. Epub 2013 Feb 18. Plant J. 2013. PMID: 23289674 Free article.

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