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A magnesium-induced triplex pre-organizes the SAM-II riboswitch.
Roy S, Lammert H, Hayes RL, Chen B, LeBlanc R, Dayie TK, Onuchic JN, Sanbonmatsu KY. Roy S, et al. Among authors: onuchic jn. PLoS Comput Biol. 2017 Mar 1;13(3):e1005406. doi: 10.1371/journal.pcbi.1005406. eCollection 2017 Mar. PLoS Comput Biol. 2017. PMID: 28248966 Free PMC article.
SMOG@ctbp: simplified deployment of structure-based models in GROMACS.
Noel JK, Whitford PC, Sanbonmatsu KY, Onuchic JN. Noel JK, et al. Among authors: onuchic jn. Nucleic Acids Res. 2010 Jul;38(Web Server issue):W657-61. doi: 10.1093/nar/gkq498. Epub 2010 Jun 4. Nucleic Acids Res. 2010. PMID: 20525782 Free PMC article.
Head swivel on the ribosome facilitates translocation by means of intra-subunit tRNA hybrid sites.
Ratje AH, Loerke J, Mikolajka A, Brünner M, Hildebrand PW, Starosta AL, Dönhöfer A, Connell SR, Fucini P, Mielke T, Whitford PC, Onuchic JN, Yu Y, Sanbonmatsu KY, Hartmann RK, Penczek PA, Wilson DN, Spahn CM. Ratje AH, et al. Among authors: onuchic jn. Nature. 2010 Dec 2;468(7324):713-6. doi: 10.1038/nature09547. Nature. 2010. PMID: 21124459 Free PMC article.
Allostery in the ferredoxin protein motif does not involve a conformational switch.
Nechushtai R, Lammert H, Michaeli D, Eisenberg-Domovich Y, Zuris JA, Luca MA, Capraro DT, Fish A, Shimshon O, Roy M, Schug A, Whitford PC, Livnah O, Onuchic JN, Jennings PA. Nechushtai R, et al. Among authors: onuchic jn. Proc Natl Acad Sci U S A. 2011 Feb 8;108(6):2240-5. doi: 10.1073/pnas.1019502108. Epub 2011 Jan 25. Proc Natl Acad Sci U S A. 2011. PMID: 21266547 Free PMC article.
325 results