Meier R - Search Results

1

digit-a tool for detection and identification of genomic interchromosomal translocations.

Meier R, Graw S, Beyerlein P, Koestler D, Molina JR, Chien J. Meier R, et al. Nucleic Acids Res. 2017 May 19;45(9):e72. doi: 10.1093/nar/gkx010. Nucleic Acids Res. 2017. PMID: 28132028 Free PMC article.

2

Robust gene expression and mutation analyses of RNA-sequencing of formalin-fixed diagnostic tumor samples.

Graw S, Meier R, Minn K, Bloomer C, Godwin AK, Fridley B, Vlad A, Beyerlein P, Chien J. Graw S, et al. Among authors: meier r. Sci Rep. 2015 Jul 23;5:12335. doi: 10.1038/srep12335. Sci Rep. 2015. PMID: 26202458 Free PMC article.

3

Low variability in the underlying cellular landscape adversely affects the performance of interaction-based approaches for conducting cell-specific analyses of DNA methylation in bulk samples.

Meier R, Nissen E, Koestler DC. Meier R, et al. Stat Appl Genet Mol Biol. 2021 Aug 10;20(3):73-84. doi: 10.1515/sagmb-2021-0004. Stat Appl Genet Mol Biol. 2021. PMID: 34378875 Free PMC article.

4

An ensemble-based Cox proportional hazards regression framework for predicting survival in metastatic castration-resistant prostate cancer (mCRPC) patients.

Meier R, Graw S, Usset J, Raghavan R, Dai J, Chalise P, Ellis S, Fridley B, Koestler D. Meier R, et al. F1000Res. 2016 Nov 16;5:2677. doi: 10.12688/f1000research.8226.1. eCollection 2016. F1000Res. 2016. PMID: 28413609 Free PMC article.

5

A Bayesian framework for identifying consistent patterns of microbial abundance between body sites.

Meier R, Thompson JA, Chung M, Zhao N, Kelsey KT, Michaud DS, Koestler DC. Meier R, et al. Stat Appl Genet Mol Biol. 2019 Nov 8;18(6):/j/sagmb.2019.18.issue-6/sagmb-2019-0027/sagmb-2019-0027.xml. doi: 10.1515/sagmb-2019-0027. Stat Appl Genet Mol Biol. 2019. PMID: 31702998 Free PMC article.

6

Improving survival prediction using a novel feature selection and feature reduction framework based on the integration of clinical and molecular data.

Neums L, Meier R, Koestler DC, Thompson JA. Neums L, et al. Among authors: meier r. Pac Symp Biocomput. 2020;25:415-426. Pac Symp Biocomput. 2020. PMID: 31797615 Free PMC article.

7

Optimizing Sample Size Allocation and Power in a Bayesian Two-Stage Drop-The-Losers Design.

Karanevich A, Meier R, Graw S, McGlothlin A, Gajewski B. Karanevich A, et al. Among authors: meier r. Am Stat. 2019;2019:10.1080/00031305.2019.1610065. doi: 10.1080/00031305.2019.1610065. Epub 2019 Jun 24. Am Stat. 2019. PMID: 32981939 Free PMC article.

8

Evolutionary Analysis of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Reveals Genomic Divergence with Implications for Universal Vaccine Efficacy.

Yellapu NK, Patel S, Zhang B, Meier R, Neums L, Pei D, Xia Q, Rotich D, Zimmermann RC, Nissen E, Bell-Glenn S, Shae W, Hu J, Chalise P, Chollet-Hinton L, Koestler DC, Thompson JA. Yellapu NK, et al. Among authors: meier r. Vaccines (Basel). 2020 Oct 8;8(4):591. doi: 10.3390/vaccines8040591. Vaccines (Basel). 2020. PMID: 33050053 Free PMC article.

9

The Microbiomes of Pancreatic and Duodenum Tissue Overlap and Are Highly Subject Specific but Differ between Pancreatic Cancer and Noncancer Subjects.

Del Castillo E, Meier R, Chung M, Koestler DC, Chen T, Paster BJ, Charpentier KP, Kelsey KT, Izard J, Michaud DS. Del Castillo E, et al. Among authors: meier r. Cancer Epidemiol Biomarkers Prev. 2019 Feb;28(2):370-383. doi: 10.1158/1055-9965.EPI-18-0542. Epub 2018 Oct 29. Cancer Epidemiol Biomarkers Prev. 2019. PMID: 30373903 Free PMC article.

10

Comparisons of oral, intestinal, and pancreatic bacterial microbiomes in patients with pancreatic cancer and other gastrointestinal diseases.

Chung M, Zhao N, Meier R, Koestler DC, Wu G, de Castillo E, Paster BJ, Charpentier K, Izard J, Kelsey KT, Michaud DS. Chung M, et al. Among authors: meier r. J Oral Microbiol. 2021 Feb 14;13(1):1887680. doi: 10.1080/20002297.2021.1887680. J Oral Microbiol. 2021. PMID: 33628398 Free PMC article.

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