van Dijk D - Search Results

1

Large-scale mapping of gene regulatory logic reveals context-dependent repression by transcriptional activators.

van Dijk D, Sharon E, Lotan-Pompan M, Weinberger A, Segal E, Carey LB. van Dijk D, et al. Genome Res. 2017 Jan;27(1):87-94. doi: 10.1101/gr.212316.116. Epub 2016 Dec 13. Genome Res. 2017. PMID: 27965290 Free PMC article.

2

Promoter sequence determines the relationship between expression level and noise.

Carey LB, van Dijk D, Sloot PM, Kaandorp JA, Segal E. Carey LB, et al. Among authors: van dijk d. PLoS Biol. 2013;11(4):e1001528. doi: 10.1371/journal.pbio.1001528. Epub 2013 Apr 2. PLoS Biol. 2013. PMID: 23565060 Free PMC article.

3

Probing the effect of promoters on noise in gene expression using thousands of designed sequences.

Sharon E, van Dijk D, Kalma Y, Keren L, Manor O, Yakhini Z, Segal E. Sharon E, et al. Among authors: van dijk d. Genome Res. 2014 Oct;24(10):1698-706. doi: 10.1101/gr.168773.113. Epub 2014 Jul 16. Genome Res. 2014. PMID: 25030889 Free PMC article.

4

Noise in gene expression is coupled to growth rate.

Keren L, van Dijk D, Weingarten-Gabbay S, Davidi D, Jona G, Weinberger A, Milo R, Segal E. Keren L, et al. Among authors: van dijk d. Genome Res. 2015 Dec;25(12):1893-902. doi: 10.1101/gr.191635.115. Epub 2015 Sep 9. Genome Res. 2015. PMID: 26355006 Free PMC article.

5

Corrigendum: Large-scale mapping of gene regulatory logic reveals context-dependent repression by transcriptional activators.

van Dijk D, Sharon E, Lotan-Pompan M, Weinberger A, Segal E, Carey LB. van Dijk D, et al. Genome Res. 2017 Mar;27(3):500. doi: 10.1101/gr.220574.117. Epub 2017 Mar 1. Genome Res. 2017. PMID: 28250019 Free PMC article. No abstract available.

6

Two DNA-encoded strategies for increasing expression with opposing effects on promoter dynamics and transcriptional noise.

Dadiani M, van Dijk D, Segal B, Field Y, Ben-Artzi G, Raveh-Sadka T, Levo M, Kaplow I, Weinberger A, Segal E. Dadiani M, et al. Among authors: van dijk d. Genome Res. 2013 Jun;23(6):966-76. doi: 10.1101/gr.149096.112. Epub 2013 Feb 12. Genome Res. 2013. PMID: 23403035 Free PMC article.

7

Publication metrics and success on the academic job market.

van Dijk D, Manor O, Carey LB. van Dijk D, et al. Curr Biol. 2014 Jun 2;24(11):R516-7. doi: 10.1016/j.cub.2014.04.039. Curr Biol. 2014. PMID: 24892909 Free article.

8

Slow-growing cells within isogenic populations have increased RNA polymerase error rates and DNA damage.

van Dijk D, Dhar R, Missarova AM, Espinar L, Blevins WR, Lehner B, Carey LB. van Dijk D, et al. Nat Commun. 2015 Aug 13;6:7972. doi: 10.1038/ncomms8972. Nat Commun. 2015. PMID: 26268986 Free PMC article.

9

Recovering Gene Interactions from Single-Cell Data Using Data Diffusion.

van Dijk D, Sharma R, Nainys J, Yim K, Kathail P, Carr AJ, Burdziak C, Moon KR, Chaffer CL, Pattabiraman D, Bierie B, Mazutis L, Wolf G, Krishnaswamy S, Pe'er D. van Dijk D, et al. Cell. 2018 Jul 26;174(3):716-729.e27. doi: 10.1016/j.cell.2018.05.061. Epub 2018 Jun 28. Cell. 2018. PMID: 29961576 Free PMC article.

10

Identifying potential survival strategies of HIV-1 through virus-host protein interaction networks.

van Dijk D, Ertaylan G, Boucher CA, Sloot PM. van Dijk D, et al. BMC Syst Biol. 2010 Jul 15;4:96. doi: 10.1186/1752-0509-4-96. BMC Syst Biol. 2010. PMID: 20633292 Free PMC article.

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