Corre E - Search Results

1

Erratum to: Bioinformatics Pipeline for Transcriptome Sequencing Analysis.

Djebali S, Wucher V, Foissac S, Hitte C, Corre E, Derrien T. Djebali S, et al. Among authors: corre e. Methods Mol Biol. 2017;1468:E1. doi: 10.1007/978-1-4939-4035-6_17. Methods Mol Biol. 2017. PMID: 27943167 No abstract available.

2

metaGOflow: a workflow for the analysis of marine Genomic Observatories shotgun metagenomics data.

Zafeiropoulos H, Beracochea M, Ninidakis S, Exter K, Potirakis A, De Moro G, Richardson L, Corre E, Machado J, Pafilis E, Kotoulas G, Santi I, Finn RD, Cox CJ, Pavloudi C. Zafeiropoulos H, et al. Among authors: corre e. Gigascience. 2022 Dec 28;12:giad078. doi: 10.1093/gigascience/giad078. Epub 2023 Oct 18. Gigascience. 2022. PMID: 37850871 Free PMC article.

3

Bioinformatics Pipeline for Transcriptome Sequencing Analysis.

Djebali S, Wucher V, Foissac S, Hitte C, Corre E, Derrien T. Djebali S, et al. Among authors: corre e. Methods Mol Biol. 2017;1468:201-19. doi: 10.1007/978-1-4939-4035-6_14. Methods Mol Biol. 2017. PMID: 27662878

4

Re-annotation, improved large-scale assembly and establishment of a catalogue of noncoding loci for the genome of the model brown alga Ectocarpus.

Cormier A, Avia K, Sterck L, Derrien T, Wucher V, Andres G, Monsoor M, Godfroy O, Lipinska A, Perrineau MM, Van De Peer Y, Hitte C, Corre E, Coelho SM, Cock JM. Cormier A, et al. Among authors: corre e. New Phytol. 2017 Apr;214(1):219-232. doi: 10.1111/nph.14321. Epub 2016 Nov 21. New Phytol. 2017. PMID: 27870061 Free article.

5

Sexual dimorphism and the evolution of sex-biased gene expression in the brown alga ectocarpus.

Lipinska A, Cormier A, Luthringer R, Peters AF, Corre E, Gachon CM, Cock JM, Coelho SM. Lipinska A, et al. Among authors: corre e. Mol Biol Evol. 2015 Jun;32(6):1581-97. doi: 10.1093/molbev/msv049. Epub 2015 Feb 27. Mol Biol Evol. 2015. PMID: 25725430

6

High-throughput sequencing on preservative ethanol is effective at jointly examining infraspecific and taxonomic diversity, although bioinformatics pipelines do not perform equally.

Couton M, Baud A, Daguin-Thiébaut C, Corre E, Comtet T, Viard F. Couton M, et al. Among authors: corre e. Ecol Evol. 2021 Mar 23;11(10):5533-5546. doi: 10.1002/ece3.7453. eCollection 2021 May. Ecol Evol. 2021. PMID: 34026027 Free PMC article.

7

Analysis of the genomic basis of functional diversity in dinoflagellates using a transcriptome-based sequence similarity network.

Meng A, Corre E, Probert I, Gutierrez-Rodriguez A, Siano R, Annamale A, Alberti A, Da Silva C, Wincker P, Le Crom S, Not F, Bittner L. Meng A, et al. Among authors: corre e. Mol Ecol. 2018 May;27(10):2365-2380. doi: 10.1111/mec.14579. Epub 2018 May 3. Mol Ecol. 2018. PMID: 29624751

8

Comparative Population Transcriptomics Provide New Insight into the Evolutionary History and Adaptive Potential of World Ocean Krill.

Choquet M, Lenner F, Cocco A, Toullec G, Corre E, Toullec JY, Wallberg A. Choquet M, et al. Among authors: corre e. Mol Biol Evol. 2023 Nov 3;40(11):msad225. doi: 10.1093/molbev/msad225. Mol Biol Evol. 2023. PMID: 37816123 Free PMC article.

9

Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress.

Dittami SM, Scornet D, Petit JL, Ségurens B, Da Silva C, Corre E, Dondrup M, Glatting KH, König R, Sterck L, Rouzé P, Van de Peer Y, Cock JM, Boyen C, Tonon T. Dittami SM, et al. Among authors: corre e. Genome Biol. 2009;10(6):R66. doi: 10.1186/gb-2009-10-6-r66. Epub 2009 Jun 16. Genome Biol. 2009. PMID: 19531237 Free PMC article.

10

WiseScaffolder: an algorithm for the semi-automatic scaffolding of Next Generation Sequencing data.

Farrant GK, Hoebeke M, Partensky F, Andres G, Corre E, Garczarek L. Farrant GK, et al. Among authors: corre e. BMC Bioinformatics. 2015 Sep 3;16:281. doi: 10.1186/s12859-015-0705-y. BMC Bioinformatics. 2015. PMID: 26335184 Free PMC article.

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