Chavent M - Search Results

1

Lipid-Loving ANTs: Molecular Simulations of Cardiolipin Interactions and the Organization of the Adenine Nucleotide Translocase in Model Mitochondrial Membranes.

Hedger G, Rouse SL, Domański J, Chavent M, Koldsø H, Sansom MS. Hedger G, et al. Among authors: chavent m. Biochemistry. 2016 Nov 15;55(45):6238-6249. doi: 10.1021/acs.biochem.6b00751. Epub 2016 Nov 4. Biochemistry. 2016. PMID: 27786441 Free PMC article.

2

Molecular Modeling and Simulation of the Mycobacterial Cell Envelope: From Individual Components to Cell Envelope Assemblies.

Brown T, Chavent M, Im W. Brown T, et al. Among authors: chavent m. J Phys Chem B. 2023 Dec 28;127(51):10941-10949. doi: 10.1021/acs.jpcb.3c06136. Epub 2023 Dec 13. J Phys Chem B. 2023. PMID: 38091517 Free PMC article. Review.

3

MDverse: Shedding Light on the Dark Matter of Molecular Dynamics Simulations.

Tiemann JKS, Szczuka M, Bouarroudj L, Oussaren M, Garcia S, Howard RJ, Delemotte L, Lindahl E, Baaden M, Lindorff-Larsen K, Chavent M, Poulain P. Tiemann JKS, et al. Among authors: chavent m. bioRxiv [Preprint]. 2024 May 3:2023.05.02.538537. doi: 10.1101/2023.05.02.538537. bioRxiv. 2024. Update in: Elife. 2024 Aug 30;12:RP90061. doi: 10.7554/eLife.90061. PMID: 37205542 Free PMC article. Updated. Preprint.

4

There and back again: bridging meso- and nano-scales to understand lipid vesicle patterning.

Cornet J, Coulonges N, Pezeshkian W, Penissat-Mahaut M, Desgrez-Dautet H, Marrink SJ, Destainville N, Chavent M, Manghi M. Cornet J, et al. Among authors: chavent m. Soft Matter. 2024 Jun 26;20(25):4998-5013. doi: 10.1039/d4sm00089g. Soft Matter. 2024. PMID: 38884641

5

Coarse-Graining the Recognition of a Glycolipid by the C-Type Lectin Mincle Receptor.

Noriega M, Corey RA, Haanappel E, Demange P, Czaplicki G, Atkinson RA, Chavent M. Noriega M, et al. Among authors: chavent m. J Phys Chem B. 2024 Oct 17;128(41):9935-9946. doi: 10.1021/acs.jpcb.4c03242. Epub 2024 Oct 5. J Phys Chem B. 2024. PMID: 39368102

6

Bendix: intuitive helix geometry analysis and abstraction.

Dahl AC, Chavent M, Sansom MS. Dahl AC, et al. Among authors: chavent m. Bioinformatics. 2012 Aug 15;28(16):2193-4. doi: 10.1093/bioinformatics/bts357. Epub 2012 Jun 23. Bioinformatics. 2012. PMID: 22730430 Free PMC article.

7

Dimerization of the EphA1 receptor tyrosine kinase transmembrane domain: Insights into the mechanism of receptor activation.

Chavent M, Chetwynd AP, Stansfeld PJ, Sansom MS. Chavent M, et al. Biochemistry. 2014 Oct 28;53(42):6641-52. doi: 10.1021/bi500800x. Epub 2014 Oct 17. Biochemistry. 2014. PMID: 25286141 Free PMC article.

8

Methodologies for the analysis of instantaneous lipid diffusion in MD simulations of large membrane systems.

Chavent M, Reddy T, Goose J, Dahl AC, Stone JE, Jobard B, Sansom MS. Chavent M, et al. Faraday Discuss. 2014;169:455-75. doi: 10.1039/c3fd00145h. Epub 2014 Jun 17. Faraday Discuss. 2014. PMID: 25341001 Free PMC article.

9

Epock: rapid analysis of protein pocket dynamics.

Laurent B, Chavent M, Cragnolini T, Dahl AC, Pasquali S, Derreumaux P, Sansom MS, Baaden M. Laurent B, et al. Among authors: chavent m. Bioinformatics. 2015 May 1;31(9):1478-80. doi: 10.1093/bioinformatics/btu822. Epub 2014 Dec 12. Bioinformatics. 2015. PMID: 25505095 Free PMC article.

10

Nothing to sneeze at: a dynamic and integrative computational model of an influenza A virion.

Reddy T, Shorthouse D, Parton DL, Jefferys E, Fowler PW, Chavent M, Baaden M, Sansom MSP. Reddy T, et al. Among authors: chavent m. Structure. 2015 Mar 3;23(3):584-597. doi: 10.1016/j.str.2014.12.019. Epub 2015 Feb 19. Structure. 2015. PMID: 25703376 Free PMC article.

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