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SnoopCGH: software for visualizing comparative genomic hybridization data.
Almagro-Garcia J, Manske M, Carret C, Campino S, Auburn S, Macinnis BL, Maslen G, Pain A, Newbold CI, Kwiatkowski DP, Clark TG. Almagro-Garcia J, et al. Among authors: clark tg. Bioinformatics. 2009 Oct 15;25(20):2732-3. doi: 10.1093/bioinformatics/btp488. Epub 2009 Aug 16. Bioinformatics. 2009. PMID: 19687029 Free PMC article.
Elucidating emergence and transmission of multidrug-resistant tuberculosis in treatment experienced patients by whole genome sequencing.
Clark TG, Mallard K, Coll F, Preston M, Assefa S, Harris D, Ogwang S, Mumbowa F, Kirenga B, O'Sullivan DM, Okwera A, Eisenach KD, Joloba M, Bentley SD, Ellner JJ, Parkhill J, Jones-López EC, McNerney R. Clark TG, et al. PLoS One. 2013 Dec 11;8(12):e83012. doi: 10.1371/journal.pone.0083012. eCollection 2013. PLoS One. 2013. PMID: 24349420 Free PMC article. Clinical Trial.
PolyTB: a genomic variation map for Mycobacterium tuberculosis.
Coll F, Preston M, Guerra-Assunção JA, Hill-Cawthorn G, Harris D, Perdigão J, Viveiros M, Portugal I, Drobniewski F, Gagneux S, Glynn JR, Pain A, Parkhill J, McNerney R, Martin N, Clark TG. Coll F, et al. Among authors: clark tg. Tuberculosis (Edinb). 2014 May;94(3):346-54. doi: 10.1016/j.tube.2014.02.005. Epub 2014 Feb 15. Tuberculosis (Edinb). 2014. PMID: 24637013 Free PMC article.
SVAMP: sequence variation analysis, maps and phylogeny.
Naeem R, Hidayah L, Preston MD, Clark TG, Pain A. Naeem R, et al. Among authors: clark tg. Bioinformatics. 2014 Aug 1;30(15):2227-9. doi: 10.1093/bioinformatics/btu176. Epub 2014 Apr 3. Bioinformatics. 2014. PMID: 24700318 Free PMC article.
A barcode of organellar genome polymorphisms identifies the geographic origin of Plasmodium falciparum strains.
Preston MD, Campino S, Assefa SA, Echeverry DF, Ocholla H, Amambua-Ngwa A, Stewart LB, Conway DJ, Borrmann S, Michon P, Zongo I, Ouédraogo JB, Djimde AA, Doumbo OK, Nosten F, Pain A, Bousema T, Drakeley CJ, Fairhurst RM, Sutherland CJ, Roper C, Clark TG. Preston MD, et al. Among authors: clark tg. Nat Commun. 2014 Jun 13;5:4052. doi: 10.1038/ncomms5052. Nat Commun. 2014. PMID: 24923250 Free PMC article.
387 results