Kolaczyk ED - Search Results

1

Peripheral Blood Transcriptomic Signatures of Fasting Glucose and Insulin Concentrations.

Chen BH, Hivert MF, Peters MJ, Pilling LC, Hogan JD, Pham LM, Harries LW, Fox CS, Bandinelli S, Dehghan A, Hernandez DG, Hofman A, Hong J, Joehanes R, Johnson AD, Munson PJ, Rybin DV, Singleton AB, Uitterlinden AG, Ying S; MAGIC Investigators; Melzer D, Levy D, van Meurs JB, Ferrucci L, Florez JC, Dupuis J, Meigs JB, Kolaczyk ED. Chen BH, et al. Among authors: kolaczyk ed. Diabetes. 2016 Dec;65(12):3794-3804. doi: 10.2337/db16-0470. Epub 2016 Sep 13. Diabetes. 2016. PMID: 27625022 Free PMC article.

2

Network-based prediction for sources of transcriptional dysregulation using latent pathway identification analysis.

Pham L, Christadore L, Schaus S, Kolaczyk ED. Pham L, et al. Among authors: kolaczyk ed. Proc Natl Acad Sci U S A. 2011 Aug 9;108(32):13347-52. doi: 10.1073/pnas.1100891108. Epub 2011 Jul 25. Proc Natl Acad Sci U S A. 2011. PMID: 21788508 Free PMC article.

3

Network-guided sparse regression modeling for detection of gene-by-gene interactions.

Lu C, Latourelle J, O'Connor GT, Dupuis J, Kolaczyk ED. Lu C, et al. Among authors: kolaczyk ed. Bioinformatics. 2013 May 15;29(10):1241-9. doi: 10.1093/bioinformatics/btt139. Epub 2013 Apr 18. Bioinformatics. 2013. PMID: 23599501 Free PMC article.

4

Improvement of experimental testing and network training conditions with genome-wide microarrays for more accurate predictions of drug gene targets.

Christadore LM, Pham L, Kolaczyk ED, Schaus SE. Christadore LM, et al. Among authors: kolaczyk ed. BMC Syst Biol. 2014 Jan 20;8:7. doi: 10.1186/1752-0509-8-7. BMC Syst Biol. 2014. PMID: 24444313 Free PMC article.

5

Modeling gene-covariate interactions in sparse regression with group structure for genome-wide association studies.

Li Y, O'Connor GT, Dupuis J, Kolaczyk E. Li Y, et al. Stat Appl Genet Mol Biol. 2015 Jun;14(3):265-77. doi: 10.1515/sagmb-2014-0073. Stat Appl Genet Mol Biol. 2015. PMID: 25938221 Free PMC article.

6

Perturbation Detection Through Modeling of Gene Expression on a Latent Biological Pathway Network: A Bayesian hierarchical approach.

Pham LM, Carvalho L, Schaus S, Kolaczyk ED. Pham LM, et al. Among authors: kolaczyk ed. J Am Stat Assoc. 2016;111(513):73-92. doi: 10.1080/01621459.2015.1110523. Epub 2016 May 5. J Am Stat Assoc. 2016. PMID: 27647944 Free PMC article.

7

Meta-Analysis for Penalized Regression Methods with Multi-Cohort Genome-Wide Association Studies.

Lu C, O'Connor GT, Dupuis J, Kolaczyk ED. Lu C, et al. Among authors: kolaczyk ed. Hum Hered. 2016;81(3):142-149. doi: 10.1159/000447969. Epub 2016 Dec 22. Hum Hered. 2016. PMID: 28002817 Free PMC article.

8

Convex combination sequence kernel association test for rare-variant studies.

Posner DC, Lin H, Meigs JB, Kolaczyk ED, Dupuis J. Posner DC, et al. Among authors: kolaczyk ed. Genet Epidemiol. 2020 Jun;44(4):352-367. doi: 10.1002/gepi.22287. Epub 2020 Feb 26. Genet Epidemiol. 2020. PMID: 32100372 Free PMC article.

9

On the choice and number of microarrays for transcriptional regulatory network inference.

Cosgrove EJ, Gardner TS, Kolaczyk ED. Cosgrove EJ, et al. Among authors: kolaczyk ed. BMC Bioinformatics. 2010 Sep 9;11:454. doi: 10.1186/1471-2105-11-454. BMC Bioinformatics. 2010. PMID: 20825684 Free PMC article.

10

Probabilistic protein function prediction from heterogeneous genome-wide data.

Nariai N, Kolaczyk ED, Kasif S. Nariai N, et al. Among authors: kolaczyk ed. PLoS One. 2007 Mar 28;2(3):e337. doi: 10.1371/journal.pone.0000337. PLoS One. 2007. PMID: 17396164 Free PMC article.

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