Bhattacharyya M - Search Results

1

The flexibility and dynamics of protein disulfide isomerase.

Römer RA, Wells SA, Emilio Jimenez-Roldan J, Bhattacharyya M, Vishweshwara S, Freedman RB. Römer RA, et al. Among authors: bhattacharyya m. Proteins. 2016 Dec;84(12):1776-1785. doi: 10.1002/prot.25159. Epub 2016 Oct 1. Proteins. 2016. PMID: 27616289 Free PMC article.

2

Allostery and conformational free energy changes in human tryptophanyl-tRNA synthetase from essential dynamics and structure networks.

Bhattacharyya M, Ghosh A, Hansia P, Vishveshwara S. Bhattacharyya M, et al. Proteins. 2010 Feb 15;78(3):506-17. doi: 10.1002/prot.22573. Proteins. 2010. PMID: 19768679

3

Protein Structure and Function: Looking through the Network of Side-Chain Interactions.

Bhattacharyya M, Ghosh S, Vishveshwara S. Bhattacharyya M, et al. Curr Protein Pept Sci. 2016;17(1):4-25. doi: 10.2174/1389203716666150923105727. Curr Protein Pept Sci. 2016. PMID: 26412788 Review.

4

Interaction signatures stabilizing the NAD(P)-binding Rossmann fold: a structure network approach.

Bhattacharyya M, Upadhyay R, Vishveshwara S. Bhattacharyya M, et al. PLoS One. 2012;7(12):e51676. doi: 10.1371/journal.pone.0051676. Epub 2012 Dec 17. PLoS One. 2012. PMID: 23284738 Free PMC article.

5

An automated approach to network features of protein structure ensembles.

Bhattacharyya M, Bhat CR, Vishveshwara S. Bhattacharyya M, et al. Protein Sci. 2013 Oct;22(10):1399-416. doi: 10.1002/pro.2333. Protein Sci. 2013. PMID: 23934896 Free PMC article.

6

Elucidation of the conformational free energy landscape in H.pylori LuxS and its implications to catalysis.

Bhattacharyya M, Vishveshwara S. Bhattacharyya M, et al. BMC Struct Biol. 2010 Aug 12;10:27. doi: 10.1186/1472-6807-10-27. BMC Struct Biol. 2010. PMID: 20704697 Free PMC article.

7

Quantum clustering and network analysis of MD simulation trajectories to probe the conformational ensembles of protein-ligand interactions.

Bhattacharyya M, Vishveshwara S. Bhattacharyya M, et al. Mol Biosyst. 2011 Jul;7(7):2320-30. doi: 10.1039/c1mb05038a. Epub 2011 May 27. Mol Biosyst. 2011. PMID: 21617814

8

Probing the allosteric mechanism in pyrrolysyl-tRNA synthetase using energy-weighted network formalism.

Bhattacharyya M, Vishveshwara S. Bhattacharyya M, et al. Biochemistry. 2011 Jul 19;50(28):6225-36. doi: 10.1021/bi200306u. Epub 2011 Jun 23. Biochemistry. 2011. PMID: 21650159

9

Network properties of protein-decoy structures.

Chatterjee S, Bhattacharyya M, Vishveshwara S. Chatterjee S, et al. Among authors: bhattacharyya m. J Biomol Struct Dyn. 2012;29(6):606-22. doi: 10.1080/07391102.2011.672625. J Biomol Struct Dyn. 2012. PMID: 22545992

10

Surveying the Side-Chain Network Approach to Protein Structure and Dynamics: The SARS-CoV-2 Spike Protein as an Illustrative Case.

Halder A, Anto A, Subramanyan V, Bhattacharyya M, Vishveshwara S, Vishveshwara S. Halder A, et al. Among authors: bhattacharyya m. Front Mol Biosci. 2020 Dec 18;7:596945. doi: 10.3389/fmolb.2020.596945. eCollection 2020. Front Mol Biosci. 2020. PMID: 33392257 Free PMC article. Review.

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