Ma'ayan A - Search Results

1

Polycomb repressive complex 2 (PRC2) silences genes responsible for neurodegeneration.

von Schimmelmann M, Feinberg PA, Sullivan JM, Ku SM, Badimon A, Duff MK, Wang Z, Lachmann A, Dewell S, Ma'ayan A, Han MH, Tarakhovsky A, Schaefer A. von Schimmelmann M, et al. Nat Neurosci. 2016 Oct;19(10):1321-30. doi: 10.1038/nn.4360. Epub 2016 Aug 15. Nat Neurosci. 2016. PMID: 27526204 Free PMC article.

2

KEA: kinase enrichment analysis.

Lachmann A, Ma'ayan A. Lachmann A, et al. Bioinformatics. 2009 Mar 1;25(5):684-6. doi: 10.1093/bioinformatics/btp026. Epub 2009 Jan 28. Bioinformatics. 2009. PMID: 19176546 Free PMC article.

3

GATE: software for the analysis and visualization of high-dimensional time series expression data.

MacArthur BD, Lachmann A, Lemischka IR, Ma'ayan A. MacArthur BD, et al. Bioinformatics. 2010 Jan 1;26(1):143-4. doi: 10.1093/bioinformatics/btp628. Epub 2009 Nov 5. Bioinformatics. 2010. PMID: 19892805 Free PMC article.

4

Systems-level dynamic analyses of fate change in murine embryonic stem cells.

Lu R, Markowetz F, Unwin RD, Leek JT, Airoldi EM, MacArthur BD, Lachmann A, Rozov R, Ma'ayan A, Boyer LA, Troyanskaya OG, Whetton AD, Lemischka IR. Lu R, et al. Nature. 2009 Nov 19;462(7271):358-62. doi: 10.1038/nature08575. Nature. 2009. PMID: 19924215 Free PMC article.

5

Lists2Networks: integrated analysis of gene/protein lists.

Lachmann A, Ma'ayan A. Lachmann A, et al. BMC Bioinformatics. 2010 Feb 12;11:87. doi: 10.1186/1471-2105-11-87. BMC Bioinformatics. 2010. PMID: 20152038 Free PMC article.

6

ChEA: transcription factor regulation inferred from integrating genome-wide ChIP-X experiments.

Lachmann A, Xu H, Krishnan J, Berger SI, Mazloom AR, Ma'ayan A. Lachmann A, et al. Bioinformatics. 2010 Oct 1;26(19):2438-44. doi: 10.1093/bioinformatics/btq466. Epub 2010 Aug 13. Bioinformatics. 2010. PMID: 20709693 Free PMC article.

7

FNV: light-weight flash-based network and pathway viewer.

Dannenfelser R, Lachmann A, Szenk M, Ma'ayan A. Dannenfelser R, et al. Bioinformatics. 2011 Apr 15;27(8):1181-2. doi: 10.1093/bioinformatics/btr098. Epub 2011 Feb 23. Bioinformatics. 2011. PMID: 21349871 Free PMC article.

8

Inferring the Sign of Kinase-Substrate Interactions by Combining Quantitative Phosphoproteomics with a Literature-Based Mammalian Kinome Network.

Hernandez M, Lachmann A, Zhao S, Xiao K, Ma'ayan A. Hernandez M, et al. Proc IEEE Int Symp Bioinformatics Bioeng. 2010;2010:180-184. doi: 10.1109/BIBE.2010.75. Proc IEEE Int Symp Bioinformatics Bioeng. 2010. PMID: 21552464 Free PMC article.

9

Receptor heteromerization expands the repertoire of cannabinoid signaling in rodent neurons.

Rozenfeld R, Bushlin I, Gomes I, Tzavaras N, Gupta A, Neves S, Battini L, Gusella GL, Lachmann A, Ma'ayan A, Blitzer RD, Devi LA. Rozenfeld R, et al. PLoS One. 2012;7(1):e29239. doi: 10.1371/journal.pone.0029239. Epub 2012 Jan 3. PLoS One. 2012. PMID: 22235275 Free PMC article.

10

Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool.

Chen EY, Tan CM, Kou Y, Duan Q, Wang Z, Meirelles GV, Clark NR, Ma'ayan A. Chen EY, et al. BMC Bioinformatics. 2013 Apr 15;14:128. doi: 10.1186/1471-2105-14-128. BMC Bioinformatics. 2013. PMID: 23586463 Free PMC article.

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