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Information-driven protein-DNA docking using HADDOCK: it is a matter of flexibility.
van Dijk M, van Dijk AD, Hsu V, Boelens R, Bonvin AM. van Dijk M, et al. Among authors: bonvin am. Nucleic Acids Res. 2006 Jul 4;34(11):3317-25. doi: 10.1093/nar/gkl412. Print 2006. Nucleic Acids Res. 2006. PMID: 16820531 Free PMC article.
In this study we extend HADDOCK (High Ambiguity Driven DOCKing) [C. Dominguez, R. Boelens and A. M. J. J. Bonvin (2003) J. Am. Chem. Soc. 125, 1731-1737] to explicitly deal with DNA flexibility. ...
In this study we extend HADDOCK (High Ambiguity Driven DOCKing) [C. Dominguez, R. Boelens and A. M. J. J. Bonvin (2003) J. Am. …
3D-DART: a DNA structure modelling server.
van Dijk M, Bonvin AM. van Dijk M, et al. Among authors: bonvin am. Nucleic Acids Res. 2009 Jul;37(Web Server issue):W235-9. doi: 10.1093/nar/gkp287. Epub 2009 May 5. Nucleic Acids Res. 2009. PMID: 19417072 Free PMC article.
276 results