Shi H - Search Results

1

Hypomethylation coordinates antagonistically with hypermethylation in cancer development: a case study of leukemia.

Kushwaha G, Dozmorov M, Wren JD, Qiu J, Shi H, Xu D. Kushwaha G, et al. Among authors: shi h. Hum Genomics. 2016 Jul 25;10 Suppl 2(Suppl 2):18. doi: 10.1186/s40246-016-0071-5. Hum Genomics. 2016. PMID: 27461342 Free PMC article.

2

Ultradeep bisulfite sequencing analysis of DNA methylation patterns in multiple gene promoters by 454 sequencing.

Taylor KH, Kramer RS, Davis JW, Guo J, Duff DJ, Xu D, Caldwell CW, Shi H. Taylor KH, et al. Among authors: shi h. Cancer Res. 2007 Sep 15;67(18):8511-8. doi: 10.1158/0008-5472.CAN-07-1016. Cancer Res. 2007. PMID: 17875690 Free article.

3

PRIMEGENS-v2: genome-wide primer design for analyzing DNA methylation patterns of CpG islands.

Srivastava GP, Guo J, Shi H, Xu D. Srivastava GP, et al. Among authors: shi h. Bioinformatics. 2008 Sep 1;24(17):1837-42. doi: 10.1093/bioinformatics/btn320. Epub 2008 Jun 25. Bioinformatics. 2008. PMID: 18579568

4

Genome-wide DNA methylation maps in follicular lymphoma cells determined by methylation-enriched bisulfite sequencing.

Choi JH, Li Y, Guo J, Pei L, Rauch TA, Kramer RS, Macmil SL, Wiley GB, Bennett LB, Schnabel JL, Taylor KH, Kim S, Xu D, Sreekumar A, Pfeifer GP, Roe BA, Caldwell CW, Bhalla KN, Shi H. Choi JH, et al. Among authors: shi h. PLoS One. 2010 Sep 29;5(9):e13020. doi: 10.1371/journal.pone.0013020. PLoS One. 2010. PMID: 20927367 Free PMC article.

5

Targeted bisulfite sequencing by solution hybrid selection and massively parallel sequencing.

Lee EJ, Pei L, Srivastava G, Joshi T, Kushwaha G, Choi JH, Robertson KD, Wang X, Colbourne JK, Zhang L, Schroth GP, Xu D, Zhang K, Shi H. Lee EJ, et al. Among authors: shi h. Nucleic Acids Res. 2011 Oct;39(19):e127. doi: 10.1093/nar/gkr598. Epub 2011 Jul 23. Nucleic Acids Res. 2011. PMID: 21785137 Free PMC article.

6

Genome-wide DNA methylation analysis reveals novel epigenetic changes in chronic lymphocytic leukemia.

Pei L, Choi JH, Liu J, Lee EJ, McCarthy B, Wilson JM, Speir E, Awan F, Tae H, Arthur G, Schnabel JL, Taylor KH, Wang X, Xu D, Ding HF, Munn DH, Caldwell C, Shi H. Pei L, et al. Among authors: shi h. Epigenetics. 2012 Jun 1;7(6):567-78. doi: 10.4161/epi.20237. Epub 2012 Jun 1. Epigenetics. 2012. PMID: 22534504 Free PMC article.

7

HOXC9 directly regulates distinct sets of genes to coordinate diverse cellular processes during neuronal differentiation.

Wang X, Choi JH, Ding J, Yang L, Ngoka LC, Lee EJ, Zha Y, Mao L, Jin B, Ren M, Cowell J, Huang S, Shi H, Cui H, Ding HF. Wang X, et al. Among authors: shi h. BMC Genomics. 2013 Nov 25;14:830. doi: 10.1186/1471-2164-14-830. BMC Genomics. 2013. PMID: 24274069 Free PMC article.

8

The expression of RUNDC3B is associated with promoter methylation in lymphoid malignancies.

Burmeister DW, Smith EH, Cristel RT, McKay SD, Shi H, Arthur GL, Davis JW, Taylor KH. Burmeister DW, et al. Among authors: shi h. Hematol Oncol. 2017 Mar;35(1):25-33. doi: 10.1002/hon.2238. Epub 2015 May 25. Hematol Oncol. 2017. PMID: 26011749 Free PMC article.

9

Identification of Global DNA Methylation Signatures in Glioblastoma-Derived Cancer Stem Cells.

Lee EJ, Rath P, Liu J, Ryu D, Pei L, Noonepalle SK, Shull AY, Feng Q, Litofsky NS, Miller DC, Anthony DC, Kirk MD, Laterra J, Deng L, Xin HB, Wang X, Choi JH, Shi H. Lee EJ, et al. Among authors: shi h. J Genet Genomics. 2015 Jul 20;42(7):355-71. doi: 10.1016/j.jgg.2015.06.003. Epub 2015 Jun 24. J Genet Genomics. 2015. PMID: 26233891 Free PMC article.

10

Predicting DNA Methylation State of CpG Dinucleotide Using Genome Topological Features and Deep Networks.

Wang Y, Liu T, Xu D, Shi H, Zhang C, Mo YY, Wang Z. Wang Y, et al. Among authors: shi h. Sci Rep. 2016 Jan 22;6:19598. doi: 10.1038/srep19598. Sci Rep. 2016. PMID: 26797014 Free PMC article.

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