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Assessment of pharmacogenomic agreement.
Safikhani Z, El-Hachem N, Quevedo R, Smirnov P, Goldenberg A, Juul Birkbak N, Mason C, Hatzis C, Shi L, Aerts HJ, Quackenbush J, Haibe-Kains B. Safikhani Z, et al. F1000Res. 2016 May 9;5:825. doi: 10.12688/f1000research.8705.1. eCollection 2016. F1000Res. 2016. PMID: 27408686 Free PMC article.
Revisiting inconsistency in large pharmacogenomic studies.
Safikhani Z, Smirnov P, Freeman M, El-Hachem N, She A, Rene Q, Goldenberg A, Birkbak NJ, Hatzis C, Shi L, Beck AH, Aerts HJWL, Quackenbush J, Haibe-Kains B. Safikhani Z, et al. F1000Res. 2016 Sep 16;5:2333. doi: 10.12688/f1000research.9611.3. eCollection 2016. F1000Res. 2016. PMID: 28928933 Free PMC article.
Tissue specificity of in vitro drug sensitivity.
Yao F, Madani Tonekaboni SA, Safikhani Z, Smirnov P, El-Hachem N, Freeman M, Manem VSK, Haibe-Kains B. Yao F, et al. J Am Med Inform Assoc. 2018 Feb 1;25(2):158-166. doi: 10.1093/jamia/ocx062. J Am Med Inform Assoc. 2018. PMID: 29016819 Free PMC article.
Assessment of Genetic Drift in Large Pharmacogenomic Studies.
Quevedo R, Smirnov P, Tkachuk D, Ho C, El-Hachem N, Safikhani Z, Pugh TJ, Haibe-Kains B. Quevedo R, et al. Cell Syst. 2020 Oct 21;11(4):393-401.e2. doi: 10.1016/j.cels.2020.08.012. Epub 2020 Sep 15. Cell Syst. 2020. PMID: 32937114 Free article.
Inconsistency in large pharmacogenomic studies.
Haibe-Kains B, El-Hachem N, Birkbak NJ, Jin AC, Beck AH, Aerts HJ, Quackenbush J. Haibe-Kains B, et al. Nature. 2013 Dec 19;504(7480):389-93. doi: 10.1038/nature12831. Epub 2013 Nov 27. Nature. 2013. PMID: 24284626 Free PMC article.
PharmacoGx: an R package for analysis of large pharmacogenomic datasets.
Smirnov P, Safikhani Z, El-Hachem N, Wang D, She A, Olsen C, Freeman M, Selby H, Gendoo DM, Grossmann P, Beck AH, Aerts HJ, Lupien M, Goldenberg A, Haibe-Kains B. Smirnov P, et al. Bioinformatics. 2016 Apr 15;32(8):1244-6. doi: 10.1093/bioinformatics/btv723. Epub 2015 Dec 9. Bioinformatics. 2016. PMID: 26656004
68 results