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Phylogenetic discovery bias in Bacillus anthracis using single-nucleotide polymorphisms from whole-genome sequencing.
Pearson T, Busch JD, Ravel J, Read TD, Rhoton SD, U'Ren JM, Simonson TS, Kachur SM, Leadem RR, Cardon ML, Van Ert MN, Huynh LY, Fraser CM, Keim P. Pearson T, et al. Among authors: keim p. Proc Natl Acad Sci U S A. 2004 Sep 14;101(37):13536-41. doi: 10.1073/pnas.0403844101. Epub 2004 Sep 3. Proc Natl Acad Sci U S A. 2004. PMID: 15347815 Free PMC article.
Strain-specific single-nucleotide polymorphism assays for the Bacillus anthracis Ames strain.
Van Ert MN, Easterday WR, Simonson TS, U'Ren JM, Pearson T, Kenefic LJ, Busch JD, Huynh LY, Dukerich M, Trim CB, Beaudry J, Welty-Bernard A, Read T, Fraser CM, Ravel J, Keim P. Van Ert MN, et al. Among authors: keim p. J Clin Microbiol. 2007 Jan;45(1):47-53. doi: 10.1128/JCM.01233-06. Epub 2006 Nov 8. J Clin Microbiol. 2007. PMID: 17093023 Free PMC article.
Anthrax, but not Bacillus anthracis?
Okinaka R, Pearson T, Keim P. Okinaka R, et al. Among authors: keim p. PLoS Pathog. 2006 Nov;2(11):e122. doi: 10.1371/journal.ppat.0020122. PLoS Pathog. 2006. PMID: 17121463 Free PMC article. No abstract available.
VNTR analysis of selected outbreaks of Burkholderia pseudomallei in Australia.
Pearson T, U'Ren JM, Schupp JM, Allan GJ, Foster PG, Mayo MJ, Gal D, Choy JL, Daugherty RL, Kachur S, Friedman CL, Leadem B, Georgia S, Hornstra H, Vogler AJ, Wagner DM, Keim P, Currie BJ. Pearson T, et al. Among authors: keim p. Infect Genet Evol. 2007 Jul;7(4):416-23. doi: 10.1016/j.meegid.2006.12.002. Epub 2006 Dec 20. Infect Genet Evol. 2007. PMID: 17258514
Tandem repeat regions within the Burkholderia pseudomallei genome and their application for high resolution genotyping.
U'Ren JM, Schupp JM, Pearson T, Hornstra H, Friedman CL, Smith KL, Daugherty RR, Rhoton SD, Leadem B, Georgia S, Cardon M, Huynh LY, DeShazer D, Harvey SP, Robison R, Gal D, Mayo MJ, Wagner D, Currie BJ, Keim P. U'Ren JM, et al. Among authors: keim p. BMC Microbiol. 2007 Mar 30;7:23. doi: 10.1186/1471-2180-7-23. BMC Microbiol. 2007. PMID: 17397553 Free PMC article.
511 results