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Cross-Platform DNA Encoding for Single-Cell Imaging of Gene Expression.
Zrazhevskiy P, Akilesh S, Tai W, Queitsch K, True LD, Fromm J, Wu D, Nelson P, Stamatoyannopoulos JA, Gao X. Zrazhevskiy P, et al. Among authors: stamatoyannopoulos ja. Angew Chem Int Ed Engl. 2016 Jul 25;55(31):8975-8. doi: 10.1002/anie.201603945. Epub 2016 Jun 7. Angew Chem Int Ed Engl. 2016. PMID: 27273345 Free PMC article.
Challenges and Approaches to Genotyping Repetitive DNA.
Morton EA, Hall AN, Kwan E, Mok C, Queitsch K, Nandakumar V, Stamatoyannopoulos J, Brewer BJ, Waterston R, Queitsch C. Morton EA, et al. G3 (Bethesda). 2020 Jan 7;10(1):417-430. doi: 10.1534/g3.119.400771. G3 (Bethesda). 2020. PMID: 31757929 Free PMC article.
Sequencing newly replicated DNA reveals widespread plasticity in human replication timing.
Hansen RS, Thomas S, Sandstrom R, Canfield TK, Thurman RE, Weaver M, Dorschner MO, Gartler SM, Stamatoyannopoulos JA. Hansen RS, et al. Among authors: stamatoyannopoulos ja. Proc Natl Acad Sci U S A. 2010 Jan 5;107(1):139-44. doi: 10.1073/pnas.0912402107. Epub 2009 Dec 4. Proc Natl Acad Sci U S A. 2010. PMID: 19966280 Free PMC article.
Widespread plasticity in CTCF occupancy linked to DNA methylation.
Wang H, Maurano MT, Qu H, Varley KE, Gertz J, Pauli F, Lee K, Canfield T, Weaver M, Sandstrom R, Thurman RE, Kaul R, Myers RM, Stamatoyannopoulos JA. Wang H, et al. Among authors: stamatoyannopoulos ja. Genome Res. 2012 Sep;22(9):1680-8. doi: 10.1101/gr.136101.111. Genome Res. 2012. PMID: 22955980 Free PMC article.
Global Regulatory DNA Potentiation by SMARCA4 Propagates to Selective Gene Expression Programs via Domain-Level Remodeling.
Lazar JE, Stehling-Sun S, Nandakumar V, Wang H, Chee DR, Howard NP, Acosta R, Dunn D, Diegel M, Neri F, Castillo A, Ibarrientos S, Lee K, Lescano N, Van Biber B, Nelson J, Halow J, Sandstrom R, Bates D, Urnov FD, Stamatoyannopoulos JA, Funnell APW. Lazar JE, et al. Among authors: stamatoyannopoulos ja. Cell Rep. 2020 May 26;31(8):107676. doi: 10.1016/j.celrep.2020.107676. Cell Rep. 2020. PMID: 32460018 Free article.
A Quantitative Proteome Map of the Human Body.
Jiang L, Wang M, Lin S, Jian R, Li X, Chan J, Dong G, Fang H, Robinson AE; GTEx Consortium; Snyder MP. Jiang L, et al. Cell. 2020 Oct 1;183(1):269-283.e19. doi: 10.1016/j.cell.2020.08.036. Epub 2020 Sep 10. Cell. 2020. PMID: 32916130 Free PMC article.
The genomics of gene expression.
Stamatoyannopoulos JA. Stamatoyannopoulos JA. Genomics. 2004 Sep;84(3):449-57. doi: 10.1016/j.ygeno.2004.05.002. Genomics. 2004. PMID: 15498452 Review.
181 results