Schwartz R - Search Results

1

Modeling Effects of RNA on Capsid Assembly Pathways via Coarse-Grained Stochastic Simulation.

Smith GR, Xie L, Schwartz R. Smith GR, et al. Among authors: schwartz r. PLoS One. 2016 May 31;11(5):e0156547. doi: 10.1371/journal.pone.0156547. eCollection 2016. PLoS One. 2016. PMID: 27244559 Free PMC article.

2

Simulation study of the contribution of oligomer/oligomer binding to capsid assembly kinetics.

Zhang T, Schwartz R. Zhang T, et al. Among authors: schwartz r. Biophys J. 2006 Jan 1;90(1):57-64. doi: 10.1529/biophysj.105.072207. Epub 2005 Oct 7. Biophys J. 2006. PMID: 16214864 Free PMC article.

3

Exploring the parameter space of complex self-assembly through virus capsid models.

Sweeney B, Zhang T, Schwartz R. Sweeney B, et al. Among authors: schwartz r. Biophys J. 2008 Feb 1;94(3):772-83. doi: 10.1529/biophysj.107.107284. Epub 2007 Oct 5. Biophys J. 2008. PMID: 17921216 Free PMC article.

4

Investigating scaling effects on virus capsid-like self-assembly using discrete event simulations.

Zhang T, Kim WT, Schwartz R. Zhang T, et al. Among authors: schwartz r. IEEE Trans Nanobioscience. 2007 Sep;6(3):235-41. doi: 10.1109/tnb.2007.903484. IEEE Trans Nanobioscience. 2007. PMID: 17926782

5

Stochastic off-lattice modeling of molecular self-assembly in crowded environments by Green's function reaction dynamics.

Lee B, Leduc PR, Schwartz R. Lee B, et al. Among authors: schwartz r. Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Sep;78(3 Pt 1):031911. doi: 10.1103/PhysRevE.78.031911. Epub 2008 Sep 12. Phys Rev E Stat Nonlin Soft Matter Phys. 2008. PMID: 18851069

6

A parameter estimation technique for stochastic self-assembly systems and its application to human papillomavirus self-assembly.

Kumar MS, Schwartz R. Kumar MS, et al. Among authors: schwartz r. Phys Biol. 2010 Dec 9;7(4):045005. doi: 10.1088/1478-3975/7/4/045005. Phys Biol. 2010. PMID: 21149973 Free PMC article.

7

Response of an actin filament network model under cyclic stretching through a coarse grained Monte Carlo approach.

Kang J, Steward RL, Kim Y, Schwartz RS, LeDuc PR, Puskar KM. Kang J, et al. Among authors: schwartz rs. J Theor Biol. 2011 Apr 7;274(1):109-19. doi: 10.1016/j.jtbi.2011.01.011. Epub 2011 Jan 15. J Theor Biol. 2011. PMID: 21241710 Free PMC article.

8

Three-dimensional stochastic off-lattice model of binding chemistry in crowded environments.

Lee B, LeDuc PR, Schwartz R. Lee B, et al. Among authors: schwartz r. PLoS One. 2012;7(1):e30131. doi: 10.1371/journal.pone.0030131. Epub 2012 Jan 17. PLoS One. 2012. PMID: 22272286 Free PMC article.

9

Surveying capsid assembly pathways through simulation-based data fitting.

Xie L, Smith GR, Feng X, Schwartz R. Xie L, et al. Among authors: schwartz r. Biophys J. 2012 Oct 3;103(7):1545-54. doi: 10.1016/j.bpj.2012.08.057. Epub 2012 Oct 2. Biophys J. 2012. PMID: 23062347 Free PMC article.

10

Applying molecular crowding models to simulations of virus capsid assembly in vitro.

Smith GR, Xie L, Lee B, Schwartz R. Smith GR, et al. Among authors: schwartz r. Biophys J. 2014 Jan 7;106(1):310-20. doi: 10.1016/j.bpj.2013.11.022. Biophys J. 2014. PMID: 24411263 Free PMC article.

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