Rambaut A - Search Results

1

SpreaD3: Interactive Visualization of Spatiotemporal History and Trait Evolutionary Processes.

Bielejec F, Baele G, Vrancken B, Suchard MA, Rambaut A, Lemey P. Bielejec F, et al. Among authors: rambaut a. Mol Biol Evol. 2016 Aug;33(8):2167-9. doi: 10.1093/molbev/msw082. Epub 2016 Apr 23. Mol Biol Evol. 2016. PMID: 27189542 Free PMC article.

2

The molecular population genetics of HIV-1 group O.

Lemey P, Pybus OG, Rambaut A, Drummond AJ, Robertson DL, Roques P, Worobey M, Vandamme AM. Lemey P, et al. Among authors: rambaut a. Genetics. 2004 Jul;167(3):1059-68. doi: 10.1534/genetics.104.026666. Genetics. 2004. PMID: 15280223 Free PMC article.

3

Phylogenetic reconstruction of a known HIV-1 CRF04_cpx transmission network using maximum likelihood and Bayesian methods.

Paraskevis D, Magiorkinis E, Magiorkinis G, Kiosses VG, Lemey P, Vandamme AM, Rambaut A, Hatzakis A. Paraskevis D, et al. Among authors: rambaut a. J Mol Evol. 2004 Nov;59(5):709-17. doi: 10.1007/s00239-004-2651-6. J Mol Evol. 2004. PMID: 15693627

4

Molecular footprint of drug-selective pressure in a human immunodeficiency virus transmission chain.

Lemey P, Derdelinckx I, Rambaut A, Van Laethem K, Dumont S, Vermeulen S, Van Wijngaerden E, Vandamme AM. Lemey P, et al. Among authors: rambaut a. J Virol. 2005 Sep;79(18):11981-9. doi: 10.1128/JVI.79.18.11981-11989.2005. J Virol. 2005. PMID: 16140774 Free PMC article.

5

HIV evolutionary dynamics within and among hosts.

Lemey P, Rambaut A, Pybus OG. Lemey P, et al. Among authors: rambaut a. AIDS Rev. 2006 Jul-Sep;8(3):125-40. AIDS Rev. 2006. PMID: 17078483 Review.

6

Synonymous substitution rates predict HIV disease progression as a result of underlying replication dynamics.

Lemey P, Kosakovsky Pond SL, Drummond AJ, Pybus OG, Shapiro B, Barroso H, Taveira N, Rambaut A. Lemey P, et al. Among authors: rambaut a. PLoS Comput Biol. 2007 Feb 16;3(2):e29. doi: 10.1371/journal.pcbi.0030029. Epub 2007 Jan 2. PLoS Comput Biol. 2007. PMID: 17305421 Free PMC article.

7

Bayesian estimation of sequence damage in ancient DNA.

Ho SY, Heupink TH, Rambaut A, Shapiro B. Ho SY, et al. Among authors: rambaut a. Mol Biol Evol. 2007 Jun;24(6):1416-22. doi: 10.1093/molbev/msm062. Epub 2007 Mar 29. Mol Biol Evol. 2007. PMID: 17395598

8

Recombination confounds the early evolutionary history of human immunodeficiency virus type 1: subtype G is a circulating recombinant form.

Abecasis AB, Lemey P, Vidal N, de Oliveira T, Peeters M, Camacho R, Shapiro B, Rambaut A, Vandamme AM. Abecasis AB, et al. Among authors: rambaut a. J Virol. 2007 Aug;81(16):8543-51. doi: 10.1128/JVI.00463-07. Epub 2007 Jun 6. J Virol. 2007. PMID: 17553886 Free PMC article.

9

Estimating the relative contribution of dNTP pool imbalance and APOBEC3G/3F editing to HIV evolution in vivo.

Deforche K, Camacho R, Laethem KV, Shapiro B, Moreau Y, Rambaut A, Vandamme AM, Lemey P. Deforche K, et al. Among authors: rambaut a. J Comput Biol. 2007 Oct;14(8):1105-14. doi: 10.1089/cmb.2007.0073. J Comput Biol. 2007. PMID: 17985990 Free article.

10

Estimation of an in vivo fitness landscape experienced by HIV-1 under drug selective pressure useful for prediction of drug resistance evolution during treatment.

Deforche K, Camacho R, Van Laethem K, Lemey P, Rambaut A, Moreau Y, Vandamme AM. Deforche K, et al. Among authors: rambaut a. Bioinformatics. 2008 Jan 1;24(1):34-41. doi: 10.1093/bioinformatics/btm540. Epub 2007 Nov 17. Bioinformatics. 2008. PMID: 18024973

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