Babu MM - Search Results

1

Discovering and understanding oncogenic gene fusions through data intensive computational approaches.

Latysheva NS, Babu MM. Latysheva NS, et al. Among authors: babu mm. Nucleic Acids Res. 2016 Jun 2;44(10):4487-503. doi: 10.1093/nar/gkw282. Epub 2016 Apr 21. Nucleic Acids Res. 2016. PMID: 27105842 Free PMC article. Review.

2

NCI: A server to identify non-canonical interactions in protein structures.

Babu MM. Babu MM. Nucleic Acids Res. 2003 Jul 1;31(13):3345-8. doi: 10.1093/nar/gkg528. Nucleic Acids Res. 2003. PMID: 12824323 Free PMC article.

3

The natural history of the WRKY-GCM1 zinc fingers and the relationship between transcription factors and transposons.

Babu MM, Iyer LM, Balaji S, Aravind L. Babu MM, et al. Nucleic Acids Res. 2006;34(22):6505-20. doi: 10.1093/nar/gkl888. Epub 2006 Nov 27. Nucleic Acids Res. 2006. PMID: 17130173 Free PMC article.

4

High-affinity DNA binding sites for H-NS provide a molecular basis for selective silencing within proteobacterial genomes.

Lang B, Blot N, Bouffartigues E, Buckle M, Geertz M, Gualerzi CO, Mavathur R, Muskhelishvili G, Pon CL, Rimsky S, Stella S, Babu MM, Travers A. Lang B, et al. Among authors: babu mm. Nucleic Acids Res. 2007;35(18):6330-7. doi: 10.1093/nar/gkm712. Epub 2007 Sep 18. Nucleic Acids Res. 2007. PMID: 17881364 Free PMC article.

5

Computational approaches to study transcriptional regulation.

Babu MM. Babu MM. Biochem Soc Trans. 2008 Aug;36(Pt 4):758-65. doi: 10.1042/BST0360758. Biochem Soc Trans. 2008. PMID: 18631154 Review.

6

Eukaryotic gene regulation in three dimensions and its impact on genome evolution.

Babu MM, Janga SC, de Santiago I, Pombo A. Babu MM, et al. Curr Opin Genet Dev. 2008 Dec;18(6):571-82. doi: 10.1016/j.gde.2008.10.002. Epub 2008 Nov 27. Curr Opin Genet Dev. 2008. PMID: 19007886

7

Investigating transcriptional regulation: from analysis of complex networks to discovery of cis-regulatory elements.

Janky R, Helden Jv, Babu MM. Janky R, et al. Among authors: babu mm. Methods. 2009 Jul;48(3):277-86. doi: 10.1016/j.ymeth.2009.04.022. Epub 2009 May 18. Methods. 2009. PMID: 19450688

8

A complex network framework for unbiased statistical analyses of DNA-DNA contact maps.

Kruse K, Sewitz S, Babu MM. Kruse K, et al. Among authors: babu mm. Nucleic Acids Res. 2013 Jan;41(2):701-10. doi: 10.1093/nar/gks1096. Epub 2012 Nov 21. Nucleic Acids Res. 2013. PMID: 23175602 Free PMC article.

9

Controlling entropy to tune the functions of intrinsically disordered regions.

Flock T, Weatheritt RJ, Latysheva NS, Babu MM. Flock T, et al. Among authors: babu mm. Curr Opin Struct Biol. 2014 Jun;26:62-72. doi: 10.1016/j.sbi.2014.05.007. Epub 2014 Jun 12. Curr Opin Struct Biol. 2014. PMID: 24930020 Review.

10

How do disordered regions achieve comparable functions to structured domains?

Latysheva NS, Flock T, Weatheritt RJ, Chavali S, Babu MM. Latysheva NS, et al. Among authors: babu mm. Protein Sci. 2015 Jun;24(6):909-22. doi: 10.1002/pro.2674. Epub 2015 May 15. Protein Sci. 2015. PMID: 25752799 Free PMC article. Review.

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