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A Study of the Infant Nasal Microbiome Development over the First Year of Life and in Relation to Their Primary Adult Caregivers Using cpn60 Universal Target (UT) as a Phylogenetic Marker.
Peterson SW, Knox NC, Golding GR, Tyler SD, Tyler AD, Mabon P, Embree JE, Fleming F, Fanella S, Van Domselaar G, Mulvey MR, Graham MR. Peterson SW, et al. Among authors: knox nc. PLoS One. 2016 Mar 28;11(3):e0152493. doi: 10.1371/journal.pone.0152493. eCollection 2016. PLoS One. 2016. PMID: 27019455 Free PMC article.
Evolutionary dynamics of Vibrio cholerae O1 following a single-source introduction to Haiti.
Katz LS, Petkau A, Beaulaurier J, Tyler S, Antonova ES, Turnsek MA, Guo Y, Wang S, Paxinos EE, Orata F, Gladney LM, Stroika S, Folster JP, Rowe L, Freeman MM, Knox N, Frace M, Boncy J, Graham M, Hammer BK, Boucher Y, Bashir A, Hanage WP, Van Domselaar G, Tarr CL. Katz LS, et al. mBio. 2013 Jul 2;4(4):e00398-13. doi: 10.1128/mBio.00398-13. mBio. 2013. PMID: 23820394 Free PMC article.
Comparative Genomics Reveal That Host-Innate Immune Responses Influence the Clinical Prevalence of Legionella pneumophila Serogroups.
Khan MA, Knox N, Prashar A, Alexander D, Abdel-Nour M, Duncan C, Tang P, Amatullah H, Dos Santos CC, Tijet N, Low DE, Pourcel C, Van Domselaar G, Terebiznik M, Ensminger AW, Guyard C. Khan MA, et al. PLoS One. 2013 Jun 27;8(6):e67298. doi: 10.1371/journal.pone.0067298. Print 2013. PLoS One. 2013. PMID: 23826259 Free PMC article.
A Primer on Infectious Disease Bacterial Genomics.
Lynch T, Petkau A, Knox N, Graham M, Van Domselaar G. Lynch T, et al. Clin Microbiol Rev. 2016 Oct;29(4):881-913. doi: 10.1128/CMR.00001-16. Epub 2016 Sep 7. Clin Microbiol Rev. 2016. PMID: 28590251 Free PMC article. Review.
SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology.
Petkau A, Mabon P, Sieffert C, Knox NC, Cabral J, Iskander M, Iskander M, Weedmark K, Zaheer R, Katz LS, Nadon C, Reimer A, Taboada E, Beiko RG, Hsiao W, Brinkman F, Graham M, Van Domselaar G. Petkau A, et al. Among authors: knox nc. Microb Genom. 2017 Jun 8;3(6):e000116. doi: 10.1099/mgen.0.000116. eCollection 2017 Jun 30. Microb Genom. 2017. PMID: 29026651 Free PMC article.
Neptune: a bioinformatics tool for rapid discovery of genomic variation in bacterial populations.
Marinier E, Zaheer R, Berry C, Weedmark KA, Domaratzki M, Mabon P, Knox NC, Reimer AR, Graham MR, Chui L, Patterson-Fortin L, Zhang J, Pagotto F, Farber J, Mahony J, Seyer K, Bekal S, Tremblay C, Isaac-Renton J, Prystajecky N, Chen J, Slade P, Van Domselaar G. Marinier E, et al. Among authors: knox nc. Nucleic Acids Res. 2017 Oct 13;45(18):e159. doi: 10.1093/nar/gkx702. Nucleic Acids Res. 2017. PMID: 29048594 Free PMC article.
44 results