Fukuda Y - Search Results

1

Redox-coupled proton transfer mechanism in nitrite reductase revealed by femtosecond crystallography.

Fukuda Y, Tse KM, Nakane T, Nakatsu T, Suzuki M, Sugahara M, Inoue S, Masuda T, Yumoto F, Matsugaki N, Nango E, Tono K, Joti Y, Kameshima T, Song C, Hatsui T, Yabashi M, Nureki O, Murphy ME, Inoue T, Iwata S, Mizohata E. Fukuda Y, et al. Proc Natl Acad Sci U S A. 2016 Mar 15;113(11):2928-33. doi: 10.1073/pnas.1517770113. Epub 2016 Feb 29. Proc Natl Acad Sci U S A. 2016. PMID: 26929369 Free PMC article.

2

Cloning, expression, purification, crystallization and preliminary X-ray crystallographic study of GK0767, the copper-containing nitrite reductase from Geobacillus kaustophilus.

Fukuda Y, Tamada T, Takami H, Suzuki S, Inoue T, Nojiri M. Fukuda Y, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Jun 1;67(Pt 6):692-5. doi: 10.1107/S1744309111013297. Epub 2011 May 26. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011. PMID: 21636914 Free PMC article.

3

Structural and mechanistic insights into the electron flow through protein for cytochrome c-tethering copper nitrite reductase.

Tsuda A, Ishikawa R, Koteishi H, Tange K, Fukuda Y, Kobayashi K, Inoue T, Nojiri M. Tsuda A, et al. Among authors: fukuda y. J Biochem. 2013 Jul;154(1):51-60. doi: 10.1093/jb/mvt023. Epub 2013 Mar 29. J Biochem. 2013. PMID: 23543476

4

Structural insights into the function of a thermostable copper-containing nitrite reductase.

Fukuda Y, Tse KM, Lintuluoto M, Fukunishi Y, Mizohata E, Matsumura H, Takami H, Nojiri M, Inoue T. Fukuda Y, et al. J Biochem. 2014 Feb;155(2):123-35. doi: 10.1093/jb/mvt107. Epub 2013 Nov 30. J Biochem. 2014. PMID: 24293549

5

Structural and functional characterization of the Geobacillus copper nitrite reductase: involvement of the unique N-terminal region in the interprotein electron transfer with its redox partner.

Fukuda Y, Koteishi H, Yoneda R, Tamada T, Takami H, Inoue T, Nojiri M. Fukuda Y, et al. Biochim Biophys Acta. 2014 Mar;1837(3):396-405. doi: 10.1016/j.bbabio.2014.01.004. Epub 2014 Jan 14. Biochim Biophys Acta. 2014. PMID: 24440558 Free article.

6

Expression from engineered Escherichia coli chromosome and crystallographic study of archaeal N,N'-diacetylchitobiose deacetylase.

Mine S, Niiyama M, Hashimoto W, Ikegami T, Koma D, Ohmoto T, Fukuda Y, Inoue T, Abe Y, Ueda T, Morita J, Uegaki K, Nakamura T. Mine S, et al. Among authors: fukuda y. FEBS J. 2014 Jun;281(11):2584-96. doi: 10.1111/febs.12805. Epub 2014 Apr 28. FEBS J. 2014. PMID: 24702737 Free article.

7

The structure of hyperthermophilic β-N-acetylglucosaminidase reveals a novel dimer architecture associated with the active site.

Mine S, Kado Y, Watanabe M, Fukuda Y, Abe Y, Ueda T, Kawarabayasi Y, Inoue T, Ishikawa K. Mine S, et al. Among authors: fukuda y. FEBS J. 2014 Nov;281(22):5092-103. doi: 10.1111/febs.13049. Epub 2014 Oct 7. FEBS J. 2014. PMID: 25227262 Free article.

8

High-temperature and high-resolution crystallography of thermostable copper nitrite reductase.

Fukuda Y, Inoue T. Fukuda Y, et al. Chem Commun (Camb). 2015 Apr 18;51(30):6532-5. doi: 10.1039/c4cc09553g. Chem Commun (Camb). 2015. PMID: 25563214

9

Insights into unknown foreign ligand in copper nitrite reductase.

Fukuda Y, Tse KM, Kado Y, Mizohata E, Matsumura H, Inoue T. Fukuda Y, et al. Biochem Biophys Res Commun. 2015 Aug 21;464(2):622-8. doi: 10.1016/j.bbrc.2015.07.025. Epub 2015 Jul 9. Biochem Biophys Res Commun. 2015. PMID: 26164233

10

Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography.

Fukuda Y, Tse KM, Suzuki M, Diederichs K, Hirata K, Nakane T, Sugahara M, Nango E, Tono K, Joti Y, Kameshima T, Song C, Hatsui T, Yabashi M, Nureki O, Matsumura H, Inoue T, Iwata S, Mizohata E. Fukuda Y, et al. J Biochem. 2016 May;159(5):527-38. doi: 10.1093/jb/mvv133. Epub 2016 Jan 14. J Biochem. 2016. PMID: 26769972 Free PMC article.

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