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Page 1
High-quality draft genome sequence of the Thermus amyloliquefaciens type strain YIM 77409(T) with an incomplete denitrification pathway.
Zhou EM, Murugapiran SK, Mefferd CC, Liu L, Xian WD, Yin YR, Ming H, Yu TT, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TB, Ngan CY, Daum C, Shapiro N, Markowitz V, Ivanova N, Spunde A, Kyrpides N, Woyke T, Li WJ, Hedlund BP. Zhou EM, et al. Among authors: palaniappan k. Stand Genomic Sci. 2016 Feb 27;11:20. doi: 10.1186/s40793-016-0140-3. eCollection 2016. Stand Genomic Sci. 2016. PMID: 26925197 Free PMC article.
Draft Genome Sequence of Pseudomonas azotifigens Strain DSM 17556T (6H33bT), a Nitrogen Fixer Strain Isolated from a Compost Pile.
Busquets A, Peña A, Gomila M, Mulet M, Mayol J, García-Valdés E, Bennasar A, Huntemann M, Han J, Chen IM, Mavromatis K, Markowitz V, Palaniappan K, Ivanova N, Schaumberg A, Pati A, Reddy TB, Nordberg H, Woyke T, Klenk HP, Kyrpides N, Lalucat J. Busquets A, et al. Among authors: palaniappan k. Genome Announc. 2013 Oct 31;1(6):e00893-13. doi: 10.1128/genomeA.00893-13. Genome Announc. 2013. PMID: 24179119 Free PMC article.
Genome Sequence of Polycyclovorans algicola Strain TG408, an Obligate Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton.
Gutierrez T, Thompson HF, Angelova A, Whitman WB, Huntemann M, Copeland A, Chen A, Kyrpides N, Markowitz V, Palaniappan K, Ivanova N, Mikhailova N, Ovchinnikova G, Andersen E, Pati A, Stamatis D, Reddy TB, Ngan CY, Chovatia M, Daum C, Shapiro N, Cantor MN, Woyke T. Gutierrez T, et al. Among authors: palaniappan k. Genome Announc. 2015 Mar 26;3(2):e00207-15. doi: 10.1128/genomeA.00207-15. Genome Announc. 2015. PMID: 25814607 Free PMC article.
Complete Genome Sequences of Caldicellulosiruptor sp. Strain Rt8.B8, Caldicellulosiruptor sp. Strain Wai35.B1, and "Thermoanaerobacter cellulolyticus".
Lee LL, Izquierdo JA, Blumer-Schuette SE, Zurawski JV, Conway JM, Cottingham RW, Huntemann M, Copeland A, Chen IM, Kyrpides N, Markowitz V, Palaniappan K, Ivanova N, Mikhailova N, Ovchinnikova G, Andersen E, Pati A, Stamatis D, Reddy TB, Shapiro N, Nordberg HP, Cantor MN, Hua SX, Woyke T, Kelly RM. Lee LL, et al. Among authors: palaniappan k. Genome Announc. 2015 May 14;3(3):e00440-15. doi: 10.1128/genomeA.00440-15. Genome Announc. 2015. PMID: 25977428 Free PMC article.
Draft Genome Sequence of Frankia sp. Strain DC12, an Atypical, Noninfective, Ineffective Isolate from Datisca cannabina.
Tisa LS, Beauchemin N, Cantor MN, Furnholm T, Ghodhbane-Gtari F, Goodwin L, Copeland A, Gtari M, Huntemann M, Ivanova N, Kyrpides N, Markowitz V, Mavrommatis K, Mikhailova N, Nouioui I, Oshone R, Ovchinnikova G, Pagani I, Palaniappan K, Pati A, Sen A, Shapiro N, Szeto E, Wall L, Wishart J, Woyke T. Tisa LS, et al. Among authors: palaniappan k. Genome Announc. 2015 Aug 6;3(4):e00889-15. doi: 10.1128/genomeA.00889-15. Genome Announc. 2015. PMID: 26251504 Free PMC article.
High-Quality Draft Genome Sequence of Kallotenue papyrolyticum JKG1T Reveals Broad Heterotrophic Capacity Focused on Carbohydrate and Amino Acid Metabolism.
Hedlund BP, Murugapiran SK, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TB, Ngan CY, Daum C, Duffy K, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Williams AJ, Cole JK, Dodsworth JA, Woyke T. Hedlund BP, et al. Among authors: palaniappan k. Genome Announc. 2015 Dec 3;3(6):e01410-15. doi: 10.1128/genomeA.01410-15. Genome Announc. 2015. PMID: 26634758 Free PMC article.
The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4).
Huntemann M, Ivanova NN, Mavromatis K, Tripp HJ, Paez-Espino D, Tennessen K, Palaniappan K, Szeto E, Pillay M, Chen IM, Pati A, Nielsen T, Markowitz VM, Kyrpides NC. Huntemann M, et al. Among authors: palaniappan k. Stand Genomic Sci. 2016 Feb 24;11:17. doi: 10.1186/s40793-016-0138-x. eCollection 2016. Stand Genomic Sci. 2016. PMID: 26918089 Free PMC article.
Erratum to: The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4).
Huntemann M, Ivanova NN, Mavromatis K, Tripp HJ, Paez-Espino D, Palaniappan K, Szeto E, Pillay M, Chen IM, Pati A, Nielsen T, Markowitz VM, Kyrpides NC. Huntemann M, et al. Among authors: palaniappan k. Stand Genomic Sci. 2016 Mar 21;11:27. doi: 10.1186/s40793-016-0148-8. eCollection 2016. Stand Genomic Sci. 2016. PMID: 27004084 Free PMC article.
High-Quality Draft Genomes from Thermus caliditerrae YIM 77777 and T. tengchongensis YIM 77401, Isolates from Tengchong, China.
Mefferd CC, Zhou EM, Yu TT, Ming H, Murugapiran SK, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TB, Ngan CY, Daum C, Duffy K, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Williams AJ, Woyke T, Li WJ, Hedlund BP. Mefferd CC, et al. Among authors: palaniappan k. Genome Announc. 2016 Apr 28;4(2):e00312-16. doi: 10.1128/genomeA.00312-16. Genome Announc. 2016. PMID: 27125486 Free PMC article.
360 results