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The genomic basis of parasitism in the Strongyloides clade of nematodes.
Hunt VL, Tsai IJ, Coghlan A, Reid AJ, Holroyd N, Foth BJ, Tracey A, Cotton JA, Stanley EJ, Beasley H, Bennett HM, Brooks K, Harsha B, Kajitani R, Kulkarni A, Harbecke D, Nagayasu E, Nichol S, Ogura Y, Quail MA, Randle N, Xia D, Brattig NW, Soblik H, Ribeiro DM, Sanchez-Flores A, Hayashi T, Itoh T, Denver DR, Grant W, Stoltzfus JD, Lok JB, Murayama H, Wastling J, Streit A, Kikuchi T, Viney M, Berriman M. Hunt VL, et al. Among authors: coghlan a. Nat Genet. 2016 Mar;48(3):299-307. doi: 10.1038/ng.3495. Epub 2016 Feb 1. Nat Genet. 2016. PMID: 26829753 Free PMC article.
The genome of the blood fluke Schistosoma mansoni.
Berriman M, Haas BJ, LoVerde PT, Wilson RA, Dillon GP, Cerqueira GC, Mashiyama ST, Al-Lazikani B, Andrade LF, Ashton PD, Aslett MA, Bartholomeu DC, Blandin G, Caffrey CR, Coghlan A, Coulson R, Day TA, Delcher A, DeMarco R, Djikeng A, Eyre T, Gamble JA, Ghedin E, Gu Y, Hertz-Fowler C, Hirai H, Hirai Y, Houston R, Ivens A, Johnston DA, Lacerda D, Macedo CD, McVeigh P, Ning Z, Oliveira G, Overington JP, Parkhill J, Pertea M, Pierce RJ, Protasio AV, Quail MA, Rajandream MA, Rogers J, Sajid M, Salzberg SL, Stanke M, Tivey AR, White O, Williams DL, Wortman J, Wu W, Zamanian M, Zerlotini A, Fraser-Liggett CM, Barrell BG, El-Sayed NM. Berriman M, et al. Among authors: coghlan a. Nature. 2009 Jul 16;460(7253):352-8. doi: 10.1038/nature08160. Nature. 2009. PMID: 19606141 Free PMC article.
The genome of the sparganosis tapeworm Spirometra erinaceieuropaei isolated from the biopsy of a migrating brain lesion.
Bennett HM, Mok HP, Gkrania-Klotsas E, Tsai IJ, Stanley EJ, Antoun NM, Coghlan A, Harsha B, Traini A, Ribeiro DM, Steinbiss S, Lucas SB, Allinson KS, Price SJ, Santarius TS, Carmichael AJ, Chiodini PL, Holroyd N, Dean AF, Berriman M. Bennett HM, et al. Among authors: coghlan a. Genome Biol. 2014;15(11):510. doi: 10.1186/PREACCEPT-2413673241432389. Genome Biol. 2014. PMID: 25413302 Free PMC article.
Comparative genomics of the major parasitic worms.
International Helminth Genomes Consortium. International Helminth Genomes Consortium. Nat Genet. 2019 Jan;51(1):163-174. doi: 10.1038/s41588-018-0262-1. Epub 2018 Nov 5. Nat Genet. 2019. PMID: 30397333 Free PMC article.
Programmed genome editing of the omega-1 ribonuclease of the blood fluke, Schistosoma mansoni.
Ittiprasert W, Mann VH, Karinshak SE, Coghlan A, Rinaldi G, Sankaranarayanan G, Chaidee A, Tanno T, Kumkhaek C, Prangtaworn P, Mentink-Kane MM, Cochran CJ, Driguez P, Holroyd N, Tracey A, Rodpai R, Everts B, Hokke CH, Hoffmann KF, Berriman M, Brindley PJ. Ittiprasert W, et al. Among authors: coghlan a. Elife. 2019 Jan 15;8:e41337. doi: 10.7554/eLife.41337. Elife. 2019. PMID: 30644357 Free PMC article.
Daily rhythms in gene expression of the human parasite Schistosoma mansoni.
Rawlinson KA, Reid AJ, Lu Z, Driguez P, Wawer A, Coghlan A, Sankaranarayanan G, Buddenborg SK, Soria CD, McCarthy C, Holroyd N, Sanders M, Hoffmann KF, Wilcockson D, Rinaldi G, Berriman M. Rawlinson KA, et al. Among authors: coghlan a. BMC Biol. 2021 Dec 2;19(1):255. doi: 10.1186/s12915-021-01189-9. BMC Biol. 2021. PMID: 34852797 Free PMC article.
A drug repurposing screen for whipworms informed by comparative genomics.
Coghlan A, Partridge FA, Duque-Correa MA, Rinaldi G, Clare S, Seymour L, Brandt C, Mkandawire TT, McCarthy C, Holroyd N, Nick M, Brown AE, Tonitiwong S, Sattelle DB, Berriman M. Coghlan A, et al. PLoS Negl Trop Dis. 2023 Sep 5;17(9):e0011205. doi: 10.1371/journal.pntd.0011205. eCollection 2023 Sep. PLoS Negl Trop Dis. 2023. PMID: 37669291 Free PMC article.
127 results