Ba-Alawi W - Search Results

1

Metabolic traits of an uncultured archaeal lineage--MSBL1--from brine pools of the Red Sea.

Mwirichia R, Alam I, Rashid M, Vinu M, Ba-Alawi W, Anthony Kamau A, Kamanda Ngugi D, Göker M, Klenk HP, Bajic V, Stingl U. Mwirichia R, et al. Sci Rep. 2016 Jan 13;6:19181. doi: 10.1038/srep19181. Sci Rep. 2016. PMID: 26758088 Free PMC article.

2

Comparative genomics reveals adaptations of a halotolerant thaumarchaeon in the interfaces of brine pools in the Red Sea.

Kamanda Ngugi D, Blom J, Alam I, Rashid M, Ba-Alawi W, Zhang G, Hikmawan T, Guan Y, Antunes A, Siam R, El Dorry H, Bajic V, Stingl U. Kamanda Ngugi D, et al. ISME J. 2015 Feb;9(2):396-411. doi: 10.1038/ismej.2014.137. Epub 2014 Aug 8. ISME J. 2015. PMID: 25105904 Free PMC article.

3

INDIGO - INtegrated data warehouse of microbial genomes with examples from the red sea extremophiles.

Alam I, Antunes A, Kamau AA, Ba Alawi W, Kalkatawi M, Stingl U, Bajic VB. Alam I, et al. PLoS One. 2013 Dec 6;8(12):e82210. doi: 10.1371/journal.pone.0082210. eCollection 2013. PLoS One. 2013. PMID: 24324765 Free PMC article.

4

Mining a database of single amplified genomes from Red Sea brine pool extremophiles-improving reliability of gene function prediction using a profile and pattern matching algorithm (PPMA).

Grötzinger SW, Alam I, Ba Alawi W, Bajic VB, Stingl U, Eppinger J. Grötzinger SW, et al. Front Microbiol. 2014 Apr 7;5:134. doi: 10.3389/fmicb.2014.00134. eCollection 2014. Front Microbiol. 2014. PMID: 24778629 Free PMC article.

5

Genomic differentiation among two strains of the PS1 clade isolated from geographically separated marine habitats.

Jimenez-Infante F, Ngugi DK, Alam I, Rashid M, Baalawi W, Kamau AA, Bajic VB, Stingl U. Jimenez-Infante F, et al. FEMS Microbiol Ecol. 2014 Jul;89(1):181-97. doi: 10.1111/1574-6941.12348. Epub 2014 May 22. FEMS Microbiol Ecol. 2014. PMID: 24785133 Free article.

6

DPubChem: a web tool for QSAR modeling and high-throughput virtual screening.

Soufan O, Ba-Alawi W, Magana-Mora A, Essack M, Bajic VB. Soufan O, et al. Sci Rep. 2018 Jun 14;8(1):9110. doi: 10.1038/s41598-018-27495-x. Sci Rep. 2018. PMID: 29904147 Free PMC article.

7

DASPfind: new efficient method to predict drug-target interactions.

Ba-Alawi W, Soufan O, Essack M, Kalnis P, Bajic VB. Ba-Alawi W, et al. J Cheminform. 2016 Mar 16;8:15. doi: 10.1186/s13321-016-0128-4. eCollection 2016. J Cheminform. 2016. PMID: 26985240 Free PMC article.

8

DRABAL: novel method to mine large high-throughput screening assays using Bayesian active learning.

Soufan O, Ba-Alawi W, Afeef M, Essack M, Kalnis P, Bajic VB. Soufan O, et al. J Cheminform. 2016 Nov 10;8:64. doi: 10.1186/s13321-016-0177-8. eCollection 2016. J Cheminform. 2016. PMID: 27895719 Free PMC article.

9

Mining Chemical Activity Status from High-Throughput Screening Assays.

Soufan O, Ba-alawi W, Afeef M, Essack M, Rodionov V, Kalnis P, Bajic VB. Soufan O, et al. PLoS One. 2015 Dec 14;10(12):e0144426. doi: 10.1371/journal.pone.0144426. eCollection 2015. PLoS One. 2015. PMID: 26658480 Free PMC article.

10

HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models.

Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. Kulakovskiy IV, et al. Nucleic Acids Res. 2016 Jan 4;44(D1):D116-25. doi: 10.1093/nar/gkv1249. Epub 2015 Nov 19. Nucleic Acids Res. 2016. PMID: 26586801 Free PMC article.

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