McCallum S - Search Results

1

MERAV: a tool for comparing gene expression across human tissues and cell types.

Shaul YD, Yuan B, Thiru P, Nutter-Upham A, McCallum S, Lanzkron C, Bell GW, Sabatini DM. Shaul YD, et al. Among authors: mccallum s. Nucleic Acids Res. 2016 Jan 4;44(D1):D560-6. doi: 10.1093/nar/gkv1337. Epub 2015 Nov 30. Nucleic Acids Res. 2016. PMID: 26626150 Free PMC article.

2

SteinerNet: a web server for integrating 'omic' data to discover hidden components of response pathways.

Tuncbag N, McCallum S, Huang SS, Fraenkel E. Tuncbag N, et al. Among authors: mccallum s. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W505-9. doi: 10.1093/nar/gks445. Epub 2012 May 25. Nucleic Acids Res. 2012. PMID: 22638579 Free PMC article.

3

TAMO: a flexible, object-oriented framework for analyzing transcriptional regulation using DNA-sequence motifs.

Gordon DB, Nekludova L, McCallum S, Fraenkel E. Gordon DB, et al. Among authors: mccallum s. Bioinformatics. 2005 Jul 15;21(14):3164-5. doi: 10.1093/bioinformatics/bti481. Epub 2005 May 19. Bioinformatics. 2005. PMID: 15905282

4

Probing multimodal ligand binding regions on ubiquitin using nuclear magnetic resonance, chromatography, and molecular dynamics simulations.

Holstein MA, Chung WK, Parimal S, Freed AS, Barquera B, McCallum SA, Cramer SM. Holstein MA, et al. Among authors: mccallum sa. J Chromatogr A. 2012 Mar 16;1229:113-20. doi: 10.1016/j.chroma.2011.12.101. Epub 2012 Jan 9. J Chromatogr A. 2012. PMID: 22281506

5

Investigation into the molecular and thermodynamic basis of protein interactions in multimodal chromatography using functionalized nanoparticles.

Srinivasan K, Parimal S, Lopez MM, McCallum SA, Cramer SM. Srinivasan K, et al. Among authors: mccallum sa. Langmuir. 2014 Nov 11;30(44):13205-16. doi: 10.1021/la502141q. Epub 2014 Oct 27. Langmuir. 2014. PMID: 25310519

6

Identification of preferred multimodal ligand-binding regions on IgG1 F_C using nuclear magnetic resonance and molecular dynamics simulations.

Gudhka RB, Bilodeau CL, McCallum SA, McCoy MA, Roush DJ, Snyder MA, Cramer SM. Gudhka RB, et al. Biotechnol Bioeng. 2021 Feb;118(2):809-822. doi: 10.1002/bit.27611. Epub 2020 Nov 6. Biotechnol Bioeng. 2021. PMID: 33107976

7

Probing IgG1 F_C-Multimodal Nanoparticle Interactions: A Combined Nuclear Magnetic Resonance and Molecular Dynamics Simulations Approach.

Gudhka RB, Vats M, Bilodeau CL, McCallum SA, McCoy MA, Roush DJ, Snyder MA, Cramer SM. Gudhka RB, et al. Langmuir. 2021 Oct 19;37(41):12188-12203. doi: 10.1021/acs.langmuir.1c02114. Epub 2021 Oct 11. Langmuir. 2021. PMID: 34633195

8

Mechanistic studies of displacer-protein binding in chemically selective displacement systems using NMR and MD simulations.

Morrison CJ, Godawat R, McCallum SA, Garde S, Cramer SM. Morrison CJ, et al. Among authors: mccallum sa. Biotechnol Bioeng. 2009 Apr 1;102(5):1428-37. doi: 10.1002/bit.22170. Biotechnol Bioeng. 2009. PMID: 19030191

9

Synthesis and characterization of fluorescent displacers for online monitoring of displacement chromatography.

Morrison CJ, Park SK, Simocko C, McCallum SA, Cramer SM, Moore JA. Morrison CJ, et al. J Am Chem Soc. 2008 Dec 17;130(50):17029-37. doi: 10.1021/ja806279x. J Am Chem Soc. 2008. PMID: 19053488

10

Pressure effects on the ensemble dynamics of ubiquitin inspected with molecular dynamics simulations and isotropic reorientational eigenmode dynamics.

Sgourakis NG, Day R, McCallum SA, Garcia AE. Sgourakis NG, et al. Biophys J. 2008 Oct;95(8):3943-55. doi: 10.1529/biophysj.108.133702. Epub 2008 Jul 11. Biophys J. 2008. PMID: 18621814 Free PMC article.

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