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RNA:DNA hybrids in the human genome have distinctive nucleotide characteristics, chromatin composition, and transcriptional relationships.
Nadel J, Athanasiadou R, Lemetre C, Wijetunga NA, Ó Broin P, Sato H, Zhang Z, Jeddeloh J, Montagna C, Golden A, Seoighe C, Greally JM. Nadel J, et al. Among authors: greally jm. Epigenetics Chromatin. 2015 Nov 16;8:46. doi: 10.1186/s13072-015-0040-6. eCollection 2015. Epigenetics Chromatin. 2015. PMID: 26579211 Free PMC article.
Comparative isoschizomer profiling of cytosine methylation: the HELP assay.
Khulan B, Thompson RF, Ye K, Fazzari MJ, Suzuki M, Stasiek E, Figueroa ME, Glass JL, Chen Q, Montagna C, Hatchwell E, Selzer RR, Richmond TA, Green RD, Melnick A, Greally JM. Khulan B, et al. Among authors: greally jm. Genome Res. 2006 Aug;16(8):1046-55. doi: 10.1101/gr.5273806. Epub 2006 Jun 29. Genome Res. 2006. PMID: 16809668 Free PMC article.
CG dinucleotide clustering is a species-specific property of the genome.
Glass JL, Thompson RF, Khulan B, Figueroa ME, Olivier EN, Oakley EJ, Van Zant G, Bouhassira EE, Melnick A, Golden A, Fazzari MJ, Greally JM. Glass JL, et al. Among authors: greally jm. Nucleic Acids Res. 2007;35(20):6798-807. doi: 10.1093/nar/gkm489. Epub 2007 Oct 10. Nucleic Acids Res. 2007. PMID: 17932072 Free PMC article.
Reduced-representation methylation mapping.
Jeddeloh JA, Greally JM, Rando OJ. Jeddeloh JA, et al. Among authors: greally jm. Genome Biol. 2008;9(8):231. doi: 10.1186/gb-2008-9-8-231. Epub 2008 Sep 1. Genome Biol. 2008. PMID: 18771577 Free PMC article. Review.
Stem and progenitor cells in myelodysplastic syndromes show aberrant stage-specific expansion and harbor genetic and epigenetic alterations.
Will B, Zhou L, Vogler TO, Ben-Neriah S, Schinke C, Tamari R, Yu Y, Bhagat TD, Bhattacharyya S, Barreyro L, Heuck C, Mo Y, Parekh S, McMahon C, Pellagatti A, Boultwood J, Montagna C, Silverman L, Maciejewski J, Greally JM, Ye BH, List AF, Steidl C, Steidl U, Verma A. Will B, et al. Among authors: greally jm. Blood. 2012 Sep 6;120(10):2076-86. doi: 10.1182/blood-2011-12-399683. Epub 2012 Jul 2. Blood. 2012. PMID: 22753872 Free PMC article.
Astrogenomics: big data, old problems, old solutions?
Golden A, Djorgovski S, Greally JM. Golden A, et al. Among authors: greally jm. Genome Biol. 2013 Aug 13;14(8):129. doi: 10.1186/gb-2013-14-8-129. Genome Biol. 2013. PMID: 23953643 Free PMC article. No abstract available.
216 results