Silverman IM - Search Results

1

Cytoplasmic poly(A) binding protein-1 binds to genomically encoded sequences within mammalian mRNAs.

Kini HK, Silverman IM, Ji X, Gregory BD, Liebhaber SA. Kini HK, et al. Among authors: silverman im. RNA. 2016 Jan;22(1):61-74. doi: 10.1261/rna.053447.115. Epub 2015 Nov 9. RNA. 2016. PMID: 26554031 Free PMC article.

2

Genomic era analyses of RNA secondary structure and RNA-binding proteins reveal their significance to post-transcriptional regulation in plants.

Silverman IM, Li F, Gregory BD. Silverman IM, et al. Plant Sci. 2013 May;205-206:55-62. doi: 10.1016/j.plantsci.2013.01.009. Epub 2013 Feb 1. Plant Sci. 2013. PMID: 23498863 Free PMC article. Review.

3

Transcriptome-wide ribonuclease-mediated protein footprinting to identify RNA-protein interaction sites.

Silverman IM, Gregory BD. Silverman IM, et al. Methods. 2015 Jan 15;72:76-85. doi: 10.1016/j.ymeth.2014.10.021. Epub 2014 Oct 28. Methods. 2015. PMID: 25448484

4

Dynamic changes in RNA-protein interactions and RNA secondary structure in mammalian erythropoiesis.

Shan M, Ji X, Janssen K, Silverman IM, Humenik J, Garcia BA, Liebhaber SA, Gregory BD. Shan M, et al. Among authors: silverman im. Life Sci Alliance. 2021 Jul 27;4(9):e202000659. doi: 10.26508/lsa.202000659. Print 2021 Sep. Life Sci Alliance. 2021. PMID: 34315813 Free PMC article.

5

Global analysis of the RNA-protein interaction and RNA secondary structure landscapes of the Arabidopsis nucleus.

Gosai SJ, Foley SW, Wang D, Silverman IM, Selamoglu N, Nelson AD, Beilstein MA, Daldal F, Deal RB, Gregory BD. Gosai SJ, et al. Among authors: silverman im. Mol Cell. 2015 Jan 22;57(2):376-88. doi: 10.1016/j.molcel.2014.12.004. Epub 2014 Dec 31. Mol Cell. 2015. PMID: 25557549 Free PMC article.

6

Chemical Modifications Mark Alternatively Spliced and Uncapped Messenger RNAs in Arabidopsis.

Vandivier LE, Campos R, Kuksa PP, Silverman IM, Wang LS, Gregory BD. Vandivier LE, et al. Among authors: silverman im. Plant Cell. 2015 Nov;27(11):3024-37. doi: 10.1105/tpc.15.00591. Epub 2015 Nov 11. Plant Cell. 2015. PMID: 26561561 Free PMC article.

7

Poly(C)-Binding Protein Pcbp2 Enables Differentiation of Definitive Erythropoiesis by Directing Functional Splicing of the Runx1 Transcript.

Ghanem LR, Kromer A, Silverman IM, Ji X, Gazzara M, Nguyen N, Aguilar G, Martinelli M, Barash Y, Liebhaber SA. Ghanem LR, et al. Among authors: silverman im. Mol Cell Biol. 2018 Jul 30;38(16):e00175-18. doi: 10.1128/MCB.00175-18. Print 2018 Aug 15. Mol Cell Biol. 2018. PMID: 29866654 Free PMC article.

8

Impact of poly(A)-tail G-content on Arabidopsis PAB binding and their role in enhancing translational efficiency.

Zhao T, Huan Q, Sun J, Liu C, Hou X, Yu X, Silverman IM, Zhang Y, Gregory BD, Liu CM, Qian W, Cao X. Zhao T, et al. Among authors: silverman im. Genome Biol. 2019 Sep 3;20(1):189. doi: 10.1186/s13059-019-1799-8. Genome Biol. 2019. PMID: 31481099 Free PMC article.

9

The Poly(C) Binding Protein Pcbp2 and Its Retrotransposed Derivative Pcbp1 Are Independently Essential to Mouse Development.

Ghanem LR, Kromer A, Silverman IM, Chatterji P, Traxler E, Penzo-Mendez A, Weiss MJ, Stanger BZ, Liebhaber SA. Ghanem LR, et al. Among authors: silverman im. Mol Cell Biol. 2015 Nov 2;36(2):304-19. doi: 10.1128/MCB.00936-15. Print 2016 Jan 15. Mol Cell Biol. 2015. PMID: 26527618 Free PMC article.

10

HAMR: high-throughput annotation of modified ribonucleotides.

Ryvkin P, Leung YY, Silverman IM, Childress M, Valladares O, Dragomir I, Gregory BD, Wang LS. Ryvkin P, et al. Among authors: silverman im. RNA. 2013 Dec;19(12):1684-92. doi: 10.1261/rna.036806.112. Epub 2013 Oct 22. RNA. 2013. PMID: 24149843 Free PMC article.

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