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DASHR: database of small human noncoding RNAs.
Leung YY, Kuksa PP, Amlie-Wolf A, Valladares O, Ungar LH, Kannan S, Gregory BD, Wang LS. Leung YY, et al. Among authors: valladares o. Nucleic Acids Res. 2016 Jan 4;44(D1):D216-22. doi: 10.1093/nar/gkv1188. Epub 2015 Nov 8. Nucleic Acids Res. 2016. PMID: 26553799 Free PMC article.
Patterns of sequence conservation in presynaptic neural genes.
Hadley D, Murphy T, Valladares O, Hannenhalli S, Ungar L, Kim J, Bućan M. Hadley D, et al. Among authors: valladares o. Genome Biol. 2006;7(11):R105. doi: 10.1186/gb-2006-7-11-r105. Genome Biol. 2006. PMID: 17096848 Free PMC article.
Global analysis of RNA secondary structure in two metazoans.
Li F, Zheng Q, Ryvkin P, Dragomir I, Desai Y, Aiyer S, Valladares O, Yang J, Bambina S, Sabin LR, Murray JI, Lamitina T, Raj A, Cherry S, Wang LS, Gregory BD. Li F, et al. Among authors: valladares o. Cell Rep. 2012 Jan 26;1(1):69-82. doi: 10.1016/j.celrep.2011.10.002. Epub 2012 Jan 26. Cell Rep. 2012. PMID: 22832108 Free article.
HAMR: high-throughput annotation of modified ribonucleotides.
Ryvkin P, Leung YY, Silverman IM, Childress M, Valladares O, Dragomir I, Gregory BD, Wang LS. Ryvkin P, et al. Among authors: valladares o. RNA. 2013 Dec;19(12):1684-92. doi: 10.1261/rna.036806.112. Epub 2013 Oct 22. RNA. 2013. PMID: 24149843 Free PMC article.
SPAR: small RNA-seq portal for analysis of sequencing experiments.
Kuksa PP, Amlie-Wolf A, Katanic Ž, Valladares O, Wang LS, Leung YY. Kuksa PP, et al. Among authors: valladares o. Nucleic Acids Res. 2018 Jul 2;46(W1):W36-W42. doi: 10.1093/nar/gky330. Nucleic Acids Res. 2018. PMID: 29733404 Free PMC article.
83 results