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Longitudinal Antigenic Sequences and Sites from Intra-Host Evolution (LASSIE) Identifies Immune-Selected HIV Variants.
Hraber P, Korber B, Wagh K, Giorgi EE, Bhattacharya T, Gnanakaran S, Lapedes AS, Learn GH, Kreider EF, Li Y, Shaw GM, Hahn BH, Montefiori DC, Alam SM, Bonsignori M, Moody MA, Liao HX, Gao F, Haynes BF. Hraber P, et al. Among authors: li y. Viruses. 2015 Oct 21;7(10):5443-75. doi: 10.3390/v7102881. Viruses. 2015. PMID: 26506369 Free PMC article.
Simian immunodeficiency virus infection in free-ranging sooty mangabeys (Cercocebus atys atys) from the Taï Forest, Côte d'Ivoire: implications for the origin of epidemic human immunodeficiency virus type 2.
Santiago ML, Range F, Keele BF, Li Y, Bailes E, Bibollet-Ruche F, Fruteau C, Noë R, Peeters M, Brookfield JF, Shaw GM, Sharp PM, Hahn BH. Santiago ML, et al. Among authors: li y. J Virol. 2005 Oct;79(19):12515-27. doi: 10.1128/JVI.79.19.12515-12527.2005. J Virol. 2005. PMID: 16160179 Free PMC article.
Chimpanzee reservoirs of pandemic and nonpandemic HIV-1.
Keele BF, Van Heuverswyn F, Li Y, Bailes E, Takehisa J, Santiago ML, Bibollet-Ruche F, Chen Y, Wain LV, Liegeois F, Loul S, Ngole EM, Bienvenue Y, Delaporte E, Brookfield JF, Sharp PM, Shaw GM, Peeters M, Hahn BH. Keele BF, et al. Among authors: li y. Science. 2006 Jul 28;313(5786):523-6. doi: 10.1126/science.1126531. Epub 2006 May 25. Science. 2006. PMID: 16728595 Free PMC article.
Ancestral and consensus envelope immunogens for HIV-1 subtype C.
Kothe DL, Li Y, Decker JM, Bibollet-Ruche F, Zammit KP, Salazar MG, Chen Y, Weng Z, Weaver EA, Gao F, Haynes BF, Shaw GM, Korber BT, Hahn BH. Kothe DL, et al. Among authors: li y. Virology. 2006 Sep 1;352(2):438-49. doi: 10.1016/j.virol.2006.05.011. Epub 2006 Jun 14. Virology. 2006. PMID: 16780913 Free article.
Genetic and neutralization properties of subtype C human immunodeficiency virus type 1 molecular env clones from acute and early heterosexually acquired infections in Southern Africa.
Li M, Salazar-Gonzalez JF, Derdeyn CA, Morris L, Williamson C, Robinson JE, Decker JM, Li Y, Salazar MG, Polonis VR, Mlisana K, Karim SA, Hong K, Greene KM, Bilska M, Zhou J, Allen S, Chomba E, Mulenga J, Vwalika C, Gao F, Zhang M, Korber BT, Hunter E, Hahn BH, Montefiori DC. Li M, et al. Among authors: li y. J Virol. 2006 Dec;80(23):11776-90. doi: 10.1128/JVI.01730-06. Epub 2006 Sep 13. J Virol. 2006. PMID: 16971434 Free PMC article.
A group M consensus envelope glycoprotein induces antibodies that neutralize subsets of subtype B and C HIV-1 primary viruses.
Liao HX, Sutherland LL, Xia SM, Brock ME, Scearce RM, Vanleeuwen S, Alam SM, McAdams M, Weaver EA, Camacho Z, Ma BJ, Li Y, Decker JM, Nabel GJ, Montefiori DC, Hahn BH, Korber BT, Gao F, Haynes BF. Liao HX, et al. Among authors: li y. Virology. 2006 Sep 30;353(2):268-82. doi: 10.1016/j.virol.2006.04.043. Virology. 2006. PMID: 17039602 Free PMC article.
Antigenicity and immunogenicity of HIV-1 consensus subtype B envelope glycoproteins.
Kothe DL, Decker JM, Li Y, Weng Z, Bibollet-Ruche F, Zammit KP, Salazar MG, Chen Y, Salazar-Gonzalez JF, Moldoveanu Z, Mestecky J, Gao F, Haynes BF, Shaw GM, Muldoon M, Korber BT, Hahn BH. Kothe DL, et al. Among authors: li y. Virology. 2007 Mar 30;360(1):218-34. doi: 10.1016/j.virol.2006.10.017. Epub 2006 Nov 13. Virology. 2007. PMID: 17097711 Free PMC article.
Adaptation of HIV-1 to its human host.
Wain LV, Bailes E, Bibollet-Ruche F, Decker JM, Keele BF, Van Heuverswyn F, Li Y, Takehisa J, Ngole EM, Shaw GM, Peeters M, Hahn BH, Sharp PM. Wain LV, et al. Among authors: li y. Mol Biol Evol. 2007 Aug;24(8):1853-60. doi: 10.1093/molbev/msm110. Epub 2007 Jun 1. Mol Biol Evol. 2007. PMID: 17545188 Free PMC article.
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